RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SLC20A1Q8WUM9 679 aa31.06■■■□□ 2.56
HOXB3-208ENST00000476342 KIF9Q9HAQ2 790 aa31.06■■■□□ 2.56
HOXB3-208ENST00000476342 TDP1Q9NUW8 608 aa31.06■■■□□ 2.56
HOXB3-208ENST00000476342 CAPN11Q9UMQ6 739 aa31.06■■■□□ 2.56
HOXB3-208ENST00000476342 HELZP42694 1942 aaKnown RBP31.05■■■□□ 2.56
HOXB3-208ENST00000476342 PIK3R2O00459 728 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 SART1O43290 800 aaKnown RBP31.05■■■□□ 2.56
HOXB3-208ENST00000476342 TLR5O60602 858 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 PRAMEF12O95522 483 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 OLFM2O95897 454 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 RALAP11233 206 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 DAOAP59103 153 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 ZBED6P86452 979 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 TDGQ13569 410 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 ZNF268Q14587 947 aaPredicted RBP31.05■■■□□ 2.56
HOXB3-208ENST00000476342 TADA2BQ86TJ2 420 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 TMEM110Q86TL2 294 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 CELF5Q8N6W0 485 aaKnown RBP31.05■■■□□ 2.56
HOXB3-208ENST00000476342 CPLX3Q8WVH0 158 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 IRGQQ8WZA9 623 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 PPP1R13BQ96KQ4 1090 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 SLC22A12Q96S37 553 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 CYP2S1Q96SQ9 504 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 CDK5RAP1Q96SZ6 601 aaKnown RBP31.05■■■□□ 2.56
HOXB3-208ENST00000476342 COL25A1Q9BXS0 654 aaPredicted RBP31.05■■■□□ 2.56
HOXB3-208ENST00000476342 NACA2Q9H009 215 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 NMUR1Q9HB89 426 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 CLIC5Q9NZA1 410 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 AIPL1Q9NZN9 384 aa31.05■■■□□ 2.56
HOXB3-208ENST00000476342 LUC7L2Q9Y383 392 aaKnown RBP31.05■■■□□ 2.56
HOXB3-208ENST00000476342 E5RJQ4 531 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 GYPCP04921 128 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 VIPR2P41587 438 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 YWHAGP61981 247 aaKnown RBP eCLIP31.04■■■□□ 2.56
HOXB3-208ENST00000476342 FMO1Q01740 532 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 TRIM72Q6ZMU5 477 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 IRF2BP2Q7Z5L9 587 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 SCD5Q86SK9 330 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 IPO4Q8TEX9 1081 aaKnown RBP31.04■■■□□ 2.56
HOXB3-208ENST00000476342 DEPDC1BQ8WUY9 529 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 CCSER2Q9H7U1 834 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 MUTYHQ9UIF7 546 aa31.04■■■□□ 2.56
HOXB3-208ENST00000476342 HEPACAM2A8MVW5 462 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 GABBR2O75899 941 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 TPM1P09493 284 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 PGFP49763 221 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 SLC44A3Q8N4M1 653 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 MSANTD4Q8NCY6 345 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 GOLGA1Q92805 767 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 USP13Q92995 863 aaPredicted RBP31.03■■■□□ 2.56
HOXB3-208ENST00000476342 CPXM1Q96SM3 734 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 MIS12Q9H081 205 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 SMG9Q9H0W8 520 aaKnown RBP31.03■■■□□ 2.56
HOXB3-208ENST00000476342 SYNCQ9H7C4 482 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP31.03■■■□□ 2.56
HOXB3-208ENST00000476342 OSER1Q9NX31 292 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 ARHGAP26Q9UNA1 814 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 BDP1A6H8Y1 2624 aa31.03■■■□□ 2.56
HOXB3-208ENST00000476342 MUC3AQ02505 3323 aa31.02■■■□□ 2.56
HOXB3-208ENST00000476342 AP5Z1O43299 807 aa31.02■■■□□ 2.56
HOXB3-208ENST00000476342 COCHO43405 550 aa31.02■■■□□ 2.56
HOXB3-208ENST00000476342 MBL2P11226 248 aaPredicted RBP31.02■■■□□ 2.56
HOXB3-208ENST00000476342 RARGP13631 454 aa31.02■■■□□ 2.56
HOXB3-208ENST00000476342 SLC7A9P82251 487 aa31.02■■■□□ 2.56
HOXB3-208ENST00000476342 ZNF276Q8N554 614 aa31.02■■■□□ 2.56
HOXB3-208ENST00000476342 RPP25Q9BUL9 199 aaKnown RBP31.02■■■□□ 2.56
HOXB3-208ENST00000476342 RNF38Q9H0F5 515 aa31.02■■■□□ 2.56
HOXB3-208ENST00000476342 CHRNB2P17787 502 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 PSMC3P17980 439 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 CASP14P31944 242 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 ATP5C1P36542 298 aaKnown RBP31.01■■■□□ 2.55
HOXB3-208ENST00000476342 NOMO3P69849 1222 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 BTBD8Q5XKL5 378 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 KLHDC10Q6PID8 442 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 VITQ6UXI7 678 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 BHLHA9Q7RTU4 235 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 MFSD6LQ8IWD5 586 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 SCUBE3Q8IX30 993 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 NDRG1Q92597 394 aaKnown RBP31.01■■■□□ 2.55
HOXB3-208ENST00000476342 SYN2Q92777 582 aaPredicted RBP31.01■■■□□ 2.55
HOXB3-208ENST00000476342 AGPAT1Q99943 283 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 CCL26Q9Y258 94 aa31.01■■■□□ 2.55
HOXB3-208ENST00000476342 YJEFN3A6XGL0 299 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 E7ENQ6 273 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 PRKCIP41743 596 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 PTPN20Q4JDL3 420 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 BPIFB1Q8TDL5 484 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 CLEC4CQ8WTT0 213 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 PLA2G2FQ9BZM2 168 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 ABCC13Q9NSE7 274 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 SEPT11Q9NVA2 429 aaKnown RBP31■■■□□ 2.55
HOXB3-208ENST00000476342 DUSP12Q9UNI6 340 aa31■■■□□ 2.55
HOXB3-208ENST00000476342 PAPSS1O43252 624 aaPredicted RBP30.99■■■□□ 2.55
HOXB3-208ENST00000476342 CYP1A1P04798 512 aaPredicted RBP30.99■■■□□ 2.55
HOXB3-208ENST00000476342 KLHL30Q0D2K2 578 aa30.99■■■□□ 2.55
HOXB3-208ENST00000476342 C10orf120Q5SQS8 335 aa30.99■■■□□ 2.55
HOXB3-208ENST00000476342 NAA35Q5VZE5 725 aa30.99■■■□□ 2.55
HOXB3-208ENST00000476342 BSPRYQ5W0U4 402 aa30.99■■■□□ 2.55
HOXB3-208ENST00000476342 RSRC2Q7L4I2 434 aaKnown RBP30.99■■■□□ 2.55
HOXB3-208ENST00000476342 ERICH1Q86X53 443 aa30.99■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms