RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 ABCG8Q9H221 673 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TMEM60Q9H2L4 133 aa4□□□□□ -1.77
LSM2-211ENST00000475835 GHITMQ9H3K2 345 aa4□□□□□ -1.77
LSM2-211ENST00000475835 PNPLA8Q9NP80 782 aa4□□□□□ -1.77
LSM2-211ENST00000475835 UVRAGQ9P2Y5 699 aa4□□□□□ -1.77
LSM2-211ENST00000475835 IL19Q9UHD0 177 aa4□□□□□ -1.77
LSM2-211ENST00000475835 TRPS1Q9UHF7 1281 aa4□□□□□ -1.77
LSM2-211ENST00000475835 MBD1Q9UIS9 605 aaPredicted RBP4□□□□□ -1.77
LSM2-211ENST00000475835 VPS4AQ9UN37 437 aa4□□□□□ -1.77
LSM2-211ENST00000475835 C19orf53Q9UNZ5 99 aaPredicted RBP4□□□□□ -1.77
LSM2-211ENST00000475835 CLEC11AQ9Y240 323 aa4□□□□□ -1.77
LSM2-211ENST00000475835 SSUH2Q9Y2M2 353 aa4□□□□□ -1.77
LSM2-211ENST00000475835 CCDC61Q9Y6R9 512 aa4□□□□□ -1.77
LSM2-211ENST00000475835 NALCNQ8IZF0 1738 aa4□□□□□ -1.77
LSM2-211ENST00000475835 USP31Q70CQ4 1352 aa4□□□□□ -1.77
LSM2-211ENST00000475835 MYH3P11055 1940 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 NEO1Q92859 1461 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 NPHP3Q7Z494 1330 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 STK36Q9NRP7 1315 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 XRN1Q8IZH2 1706 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 EDC4Q6P2E9 1401 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 ATP10DQ9P241 1426 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 POTEB3A0JP26 581 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 LRRC14BA6NHZ5 514 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 SOBPA7XYQ1 873 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 DCDC2CA8MYV0 355 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 C2orf74A8MZ97 194 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 B4E1Z4 1266 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 USP17L13C9JLJ4 530 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 USP17L17D6RBQ6 530 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 H7C0C1 242 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 PSMD11O00231 422 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 ZBTB7BO15156 539 aaPredicted RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 TREHO43280 583 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 PPIP5K2O43314 1243 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 FRS3O43559 492 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 KRT86O43790 486 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 NOS1APO75052 506 aaPredicted RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 SOAT2O75908 522 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 RSL1D1O76021 490 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 FAM13AO94988 1023 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 ADAMTS2O95450 1211 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 HSPA4LO95757 839 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 CFBP00751 764 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 IFNA16P05015 189 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 FAM228BP0C875 321 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 HSMCR30P0CW71 290 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 SRGAP2BP0DMP2 458 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 PIM1P11309 404 aaPredicted RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 PRPS2P11908 318 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 NQO1P15559 274 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 RAG1P15918 1043 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 NPR3P17342 541 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 SLC9A1P19634 815 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 CHMP24386 653 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 NMT1P30419 496 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 POLR2BP30876 1174 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 IARSP41252 1262 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 PRCPP42785 496 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 KCNJ5P48544 419 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 CCT3P49368 545 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 DGKGP49619 791 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 CEBPAP49715 358 aaPredicted RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 GSK3AP49840 483 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 HNMTP50135 292 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 ZNF135P52742 658 aaPredicted RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 CACNA2D1P54289 1103 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 PSMD4P55036 377 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 COPS2P61201 443 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 RPL10AP62906 217 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 ASIC1P78348 528 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 PRAMEP78395 509 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 ABATP80404 500 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 MRPS5P82675 430 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 FOXK2Q01167 660 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 OCRLQ01968 901 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 DUSP4Q13115 394 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 CLN3Q13286 438 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 AP3B2Q13367 1082 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 CUL4AQ13619 759 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 CAPRIN1Q14444 709 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 ITIH4Q14624 930 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 FASTKD3Q14CZ7 662 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 EFTUD2Q15029 972 aaKnown RBP eCLIP3.99□□□□□ -1.77
LSM2-211ENST00000475835 PFKFB4Q16877 469 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 ABCB5Q2M3G0 1257 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 GLE1Q53GS7 698 aaKnown RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 SLC45A4Q5BKX6 768 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 TEX30Q5JUR7 227 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 BRMS1LQ5PSV4 323 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 TCHHL1Q5QJ38 904 aaPredicted RBP3.99□□□□□ -1.77
LSM2-211ENST00000475835 TMEM63BQ5T3F8 832 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 USPL1Q5W0Q7 1092 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 SLC6A19Q695T7 634 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 CASC4Q6P4E1 433 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 WDR73Q6P4I2 378 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 KLHL35Q6PF15 583 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 POTEBQ6S5H4 581 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 IGF2-ASQ6U949 168 aa3.99□□□□□ -1.77
LSM2-211ENST00000475835 NSMFQ6X4W1 530 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms