RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DMAP1Q9NPF5 467 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-207ENST00000475549 KRT82Q9NSB4 513 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 FAM49BQ9NUQ9 324 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 EHD2Q9NZN4 543 aa7.44□□□□□ -1.22
HDAC3-207ENST00000475549 EPG5Q9HCE0 2579 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 A0A1W2PQ27 194 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 A0A1W2PQ64 194 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 A0A1W2PQD8 194 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 E2F8A0AVK6 867 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 BCLAF3A2AJT9 711 aaKnown RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 MAPK13O15264 365 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 CYP26A1O43174 497 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 CILPO75339 1184 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 RTN3O95197 1032 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 KLF8O95600 359 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 MYL1P05976 194 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 ADRB1P08588 477 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 ADH5P11766 374 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 ADORA2BP29275 332 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 TIE1P35590 1138 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 MPLP40238 635 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 GRIA2P42262 883 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 SYKP43405 635 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 TUBP50607 506 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 INCA1Q0VD86 236 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 ADAM9Q13443 819 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 NFIL3Q16649 462 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 PPM1JQ5JR12 505 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 STPG1Q5TH74 334 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 ANO7Q6IWH7 933 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 CLEC20AQ6ZU45 233 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 SCD5Q86SK9 330 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 UNC93AQ86WB7 457 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 NAT16Q8N8M0 369 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 PDZD8Q8NEN9 1154 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 TSTD1Q8NFU3 115 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 OLIG1Q8TAK6 271 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 RLN3Q8WXF3 142 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 TAF4BQ92750 862 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 TNIP3Q96KP6 325 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 CNOT6LQ96LI5 555 aaKnown RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 HNRNPABQ99729 332 aaKnown RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 DUSP9Q99956 384 aaKnown RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 MED10Q9BTT4 135 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 TPSD1Q9BZJ3 242 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 GDPD2Q9HCC8 539 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 CD248Q9HCU0 757 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 COMMD8Q9NX08 183 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 USP25Q9UHP3 1055 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 MBD1Q9UIS9 605 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 NUDT5Q9UKK9 219 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 MMP17Q9ULZ9 603 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 PCDHGA5Q9Y5G8 931 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 ASPMQ8IZT6 3477 aa7.43□□□□□ -1.22
HDAC3-207ENST00000475549 NUP210Q8TEM1 1887 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 KIF26AQ9ULI4 1882 aaPredicted RBP7.43□□□□□ -1.22
HDAC3-207ENST00000475549 A0A1W2PQH9 124 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 PATE3B3GLJ2 98 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 PRRT4C9JH25 899 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 SLC9A3R1O14745 358 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-207ENST00000475549 MDM4O15151 490 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 CALUO43852 315 aaPredicted RBP7.42□□□□□ -1.22
HDAC3-207ENST00000475549 TLR5O60602 858 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 TULP3O75386 442 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 ZNF202O95125 648 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 ADH1CP00326 375 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 KLKB1P03952 638 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 CISD3P0C7P0 127 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 CD58P19256 250 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 NR2F2P24468 414 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 EIF2DP41214 584 aaKnown RBP7.42□□□□□ -1.22
HDAC3-207ENST00000475549 TNFRSF4P43489 277 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 DGKEP52429 567 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 LIMK1P53667 647 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 PMS1P54277 932 aaKnown RBP7.42□□□□□ -1.22
HDAC3-207ENST00000475549 KRT85P78386 507 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 MRPS21P82921 87 aaKnown RBP7.42□□□□□ -1.22
HDAC3-207ENST00000475549 CREB5Q02930 508 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 GAD2Q05329 585 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 KDSRQ06136 332 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 MAP7D1Q3KQU3 841 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 PMS2CLQ68D20 193 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 HTR3DQ70Z44 454 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 GUF1Q8N442 669 aaKnown RBP7.42□□□□□ -1.22
HDAC3-207ENST00000475549 EXOC4Q96A65 974 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 JAKMIP2Q96AA8 810 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 ACDQ96AP0 544 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 CYFIP2Q96F07 1278 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 ACOX2Q99424 681 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 ARID3AQ99856 593 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 LSM14BQ9BX40 385 aaKnown RBP7.42□□□□□ -1.22
HDAC3-207ENST00000475549 CYLDQ9NQC7 956 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 ARHGEF4Q9NR80 690 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 SPHK2Q9NRA0 654 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 VPS45Q9NRW7 570 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 TMEM74BQ9NUR3 256 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 TBC1D14Q9P2M4 693 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 SCML2Q9UQR0 700 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 FRMD4BQ9Y2L6 1034 aa7.42□□□□□ -1.22
HDAC3-207ENST00000475549 USP3Q9Y6I4 520 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms