RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 AVPR1AP37288 418 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 GRIK1P39086 918 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 CACNA2D1P54289 1103 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 USP46P62068 366 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 CYP27A1Q02318 531 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 DENND5BQ6ZUT9 1274 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 PAQR9Q6ZVX9 377 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 ENOSF1Q7L5Y1 443 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 RALGPS2Q86X27 583 aaPredicted RBP16.53■□□□□ 0.24
CPSF3-203ENST00000475482 NKD2Q969F2 451 aaPredicted RBP16.53■□□□□ 0.24
CPSF3-203ENST00000475482 NT5C1BQ96P26 610 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 SLC22A12Q96S37 553 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 IER2Q9BTL4 223 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 B3GNT5Q9BYG0 378 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 ZNF518BQ9C0D4 1074 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 ELOVL4Q9GZR5 314 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 SEMA4AQ9H3S1 761 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 NLRC4Q9NPP4 1024 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 PRMT8Q9NR22 394 aaPredicted RBP16.53■□□□□ 0.24
CPSF3-203ENST00000475482 BZW2Q9Y6E2 419 aaKnown RBP16.53■□□□□ 0.24
CPSF3-203ENST00000475482 GPR179Q6PRD1 2367 aa16.53■□□□□ 0.24
CPSF3-203ENST00000475482 MYH10P35580 1976 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 LRRC53A6NM62 1247 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 F8VP50 259 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 SPECC1L-ADORA2AF8WAN1 911 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 IPO7O95373 1038 aaKnown RBP16.52■□□□□ 0.24
CPSF3-203ENST00000475482 PFKLP17858 780 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 PIK3CAP42336 1068 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 MFAP3P55082 362 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 GOLGA8FQ08AF8 430 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 GOLGA8DPQ0D2H9 430 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 MEA1Q16626 185 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 SMYD5Q6GMV2 418 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 TXNDC11Q6PKC3 985 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 CCDC170Q8IYT3 715 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 CRYBG2Q8N1P7 616 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 KIAA1524Q8TCG1 905 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 BAP1Q92560 729 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 CHFRQ96EP1 664 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 STK33Q9BYT3 514 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 SIX2Q9NPC8 291 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 HPS4Q9NQG7 708 aa16.52■□□□□ 0.24
CPSF3-203ENST00000475482 SPATA6Q9NWH7 488 aaPredicted RBP16.52■□□□□ 0.24
CPSF3-203ENST00000475482 THG1LQ9NWX6 298 aaKnown RBP16.52■□□□□ 0.24
CPSF3-203ENST00000475482 ZNF292O60281 2723 aa16.52■□□□□ 0.23
CPSF3-203ENST00000475482 WDR87Q6ZQQ6 2873 aa16.52■□□□□ 0.23
CPSF3-203ENST00000475482 RNF225M0QZC1 329 aaPredicted RBP16.51■□□□□ 0.23
CPSF3-203ENST00000475482 EPHB6O15197 1021 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 ZSCAN12O43309 604 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 LAMTOR5O43504 91 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 HLA-DRAP01903 254 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 CYLC1P35663 651 aaPredicted RBP16.51■□□□□ 0.23
CPSF3-203ENST00000475482 STAT1P42224 750 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 ASPAP45381 313 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 RAP1GAPP47736 663 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 SOX9P48436 509 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 PPP3CCP48454 512 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 TNK2Q07912 1038 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 MTAPQ13126 283 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 RAPGEF1Q13905 1077 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 ZNF77Q15935 545 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 UNC93AQ86WB7 457 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 TMEM139Q8IV31 216 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 LMO3Q8TAP4 145 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 ELMO3Q96BJ8 720 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 TNIP3Q96KP6 325 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 CYP2S1Q96SQ9 504 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 LMAN1LQ9HAT1 526 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 GKN1Q9NS71 199 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 IL37Q9NZH6 218 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 EHD2Q9NZN4 543 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 AIPL1Q9NZN9 384 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 DNAJC12Q9UKB3 198 aa16.51■□□□□ 0.23
CPSF3-203ENST00000475482 NDRG2Q9UN36 371 aaKnown RBP16.51■□□□□ 0.23
CPSF3-203ENST00000475482 TRAV19A0A0A6YYK7 116 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 C2orf78A6NCI8 922 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 ZNF840PA6NDX5 716 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 OTOL1A6NHN0 477 aaPredicted RBP16.5■□□□□ 0.23
CPSF3-203ENST00000475482 CLDN5O00501 218 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 OLFM2O95897 454 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 SERPING1P05155 500 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 USP17L7P0C7H9 530 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 TDGF1P13385 188 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 P4HA1P13674 534 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 FERP16591 822 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 ANXA13P27216 316 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 KPNA1P52294 538 aaPredicted RBP16.5■□□□□ 0.23
CPSF3-203ENST00000475482 INCA1Q0VD86 236 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 USP4Q13107 963 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 GAS6Q14393 721 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 ASIC2Q16515 512 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 ITPRIPL2Q3MIP1 535 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 SPOPLQ6IQ16 392 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 DPY19L2P1Q6NXN4 242 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 FUKQ8N0W3 1084 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 ZBTB44Q8NCP5 570 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 TAS1R2Q8TE23 839 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 JAKMIP2Q96AA8 810 aa16.5■□□□□ 0.23
CPSF3-203ENST00000475482 APOBEC3GQ9HC16 384 aaKnown RBP16.5■□□□□ 0.23
CPSF3-203ENST00000475482 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms