RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 C1QTNF9P0C862 333 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 CHRM1P11229 460 aaPredicted RBP13.1□□□□□ -0.31
TTC38-206ENST00000475467 ENGP17813 658 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 ASIC1P78348 528 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 STK38Q15208 465 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 CCDC142Q17RM4 750 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 BMT2Q1RMZ1 405 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 ZNF667Q5HYK9 610 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 SYCP2LQ5T4T6 812 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 KLHDC10Q6PID8 442 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 UNC13DQ70J99 1090 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 HTR3DQ70Z44 454 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 PIP4P1Q86T03 277 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 TADA2BQ86TJ2 420 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 UNC93AQ86WB7 457 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 TTC30AQ86WT1 665 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 PHTF2Q8N3S3 785 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 ZNF276Q8N554 614 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 TAF4BQ92750 862 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 GATA6Q92908 595 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 FOXJ1Q92949 421 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 ZNF396Q96N95 335 aaPredicted RBP13.1□□□□□ -0.31
TTC38-206ENST00000475467 USP28Q96RU2 1077 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 TMEM121BQ9BXQ6 578 aaPredicted RBP13.1□□□□□ -0.31
TTC38-206ENST00000475467 B3GNT5Q9BYG0 378 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 PANK2Q9BZ23 570 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 ZDHHC5Q9C0B5 715 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 ZNF518BQ9C0D4 1074 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 TLR8Q9NR97 1041 aaKnown RBP13.1□□□□□ -0.31
TTC38-206ENST00000475467 LSM7Q9UK45 103 aaKnown RBP13.1□□□□□ -0.31
TTC38-206ENST00000475467 CHD6Q8TD26 2715 aa13.1□□□□□ -0.31
TTC38-206ENST00000475467 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 SPTLC2O15270 562 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 TGFB1I1O43294 461 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 HOXB2P14652 356 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 GNSP15586 552 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 HOXD13P35453 343 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 PTGER3P43115 390 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 PSEN1P49768 467 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 CLDN10P78369 228 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 RPL6Q02878 288 aaKnown RBP13.09□□□□□ -0.31
TTC38-206ENST00000475467 CEBPZQ03701 1054 aaKnown RBP13.09□□□□□ -0.31
TTC38-206ENST00000475467 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 E2F4Q16254 413 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 ANO4Q32M45 955 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 GRAMD4Q6IC98 578 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 METTL3Q86U44 580 aaKnown RBP13.09□□□□□ -0.31
TTC38-206ENST00000475467 TMEFF1Q8IYR6 380 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 PDILTQ8N807 584 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 RDH13Q8NBN7 331 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 LINC00301Q8NCQ3 95 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 DEFB124Q8NES8 71 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 SCFD1Q8WVM8 642 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 RLN3Q8WXF3 142 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 CCDC127Q96BQ5 260 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 ZFRQ96KR1 1074 aaKnown RBP13.09□□□□□ -0.31
TTC38-206ENST00000475467 CDK5RAP1Q96SZ6 601 aaKnown RBP13.09□□□□□ -0.31
TTC38-206ENST00000475467 FGFBP2Q9BYJ0 223 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 CEP295Q9C0D2 2601 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 XYLT2Q9H1B5 865 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 CAPN10Q9HC96 672 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 PNPLA8Q9NP80 782 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 MARK1Q9P0L2 795 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 TFIP11Q9UBB9 837 aaKnown RBP13.09□□□□□ -0.31
TTC38-206ENST00000475467 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
TTC38-206ENST00000475467 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
TTC38-206ENST00000475467 ZNF510Q9Y2H8 683 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 CFAP47Q6ZTR5 3102 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 CACNA1GO43497 2377 aa13.09□□□□□ -0.31
TTC38-206ENST00000475467 MYOFQ9NZM1 2061 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 ARHGAP33O14559 1287 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 CACNG3O60359 315 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 EXOC3O60645 756 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 CUTAO60888 179 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 YEATS4O95619 227 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 CFIP05156 583 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 HNRNPLP14866 589 aaKnown RBP eCLIP13.08□□□□□ -0.32
TTC38-206ENST00000475467 ATP5C1P36542 298 aaKnown RBP13.08□□□□□ -0.32
TTC38-206ENST00000475467 SLC5A3P53794 718 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 EHHADHQ08426 723 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 KNOP1Q1ED39 458 aaKnown RBP13.08□□□□□ -0.32
TTC38-206ENST00000475467 SGSM1Q2NKQ1 1148 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 ZNF699Q32M78 642 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 WDR45BQ5MNZ6 344 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 C10orf76Q5T2E6 689 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 SCARA3Q6AZY7 606 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 FAM35AQ86V20 835 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 C12orf40Q86WS4 652 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 CRYBG2Q8N1P7 616 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 ZNF419Q96HQ0 510 aaPredicted RBP13.08□□□□□ -0.32
TTC38-206ENST00000475467 MED10Q9BTT4 135 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 BACH2Q9BYV9 841 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 CSNK1G1Q9HCP0 422 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 CYLDQ9NQC7 956 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 TMEM74BQ9NUR3 256 aa13.08□□□□□ -0.32
TTC38-206ENST00000475467 DNAAF2Q9NVR5 837 aaKnown RBP13.08□□□□□ -0.32
TTC38-206ENST00000475467 CHORDC1Q9UHD1 332 aaPredicted RBP13.08□□□□□ -0.32
TTC38-206ENST00000475467 MBD1Q9UIS9 605 aaPredicted RBP13.08□□□□□ -0.32
TTC38-206ENST00000475467 TNRC6BQ9UPQ9 1833 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms