RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 PCNX2A6NKB5 2137 aa21.74■■□□□ 1.07
VPS36-203ENST00000475375 TULP3O75386 442 aa21.73■■□□□ 1.07
VPS36-203ENST00000475375 TACC1O75410 805 aa21.73■■□□□ 1.07
VPS36-203ENST00000475375 RTN3O95197 1032 aaPredicted RBP21.73■■□□□ 1.07
VPS36-203ENST00000475375 IRF1P10914 325 aa21.73■■□□□ 1.07
VPS36-203ENST00000475375 PHTF2Q8N3S3 785 aa21.73■■□□□ 1.07
VPS36-203ENST00000475375 OR2I1PQ8NGU4 316 aa21.73■■□□□ 1.07
VPS36-203ENST00000475375 B3GNT5Q9BYG0 378 aa21.73■■□□□ 1.07
VPS36-203ENST00000475375 SPHK2Q9NRA0 654 aa21.73■■□□□ 1.07
VPS36-203ENST00000475375 CHORDC1Q9UHD1 332 aaPredicted RBP21.73■■□□□ 1.07
VPS36-203ENST00000475375 HOXC11O43248 304 aaPredicted RBP21.72■■□□□ 1.07
VPS36-203ENST00000475375 CST3P01034 146 aaPredicted RBP21.72■■□□□ 1.07
VPS36-203ENST00000475375 NTSR1P30989 418 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 FAM193AP78312 1265 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 ERICH6BQ5W0A0 696 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 SDE2Q6IQ49 451 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 BBS7Q8IWZ6 715 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 ETFBKMTQ8IXQ9 262 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 TERB1Q8NA31 727 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 SPRYD3Q8NCJ5 442 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 B3GALNT2Q8NCR0 500 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 GLIS3Q8NEA6 775 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 KCNV2Q8TDN2 545 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 OVCA2Q8WZ82 227 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 HPS3Q969F9 1004 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 CCDC127Q96BQ5 260 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 ZFRQ96KR1 1074 aaKnown RBP21.72■■□□□ 1.07
VPS36-203ENST00000475375 MED10Q9BTT4 135 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 CAPN10Q9HC96 672 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 NXF1Q9UBU9 619 aaKnown RBP21.72■■□□□ 1.07
VPS36-203ENST00000475375 CYP8B1Q9UNU6 501 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 ATP8B3O60423 1300 aa21.72■■□□□ 1.07
VPS36-203ENST00000475375 FASNP49327 2511 aaKnown RBP21.72■■□□□ 1.07
VPS36-203ENST00000475375 NBEAQ8NFP9 2946 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 ARHGAP33O14559 1287 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 SYPP08247 313 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 TRPC3Q13507 836 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 SNRNP35Q16560 246 aaKnown RBP21.71■■□□□ 1.07
VPS36-203ENST00000475375 ZNF423Q2M1K9 1284 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 GRAMD4Q6IC98 578 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 TMEM25Q86YD3 366 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 PDILTQ8N807 584 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 SCAMP5Q8TAC9 235 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 HSPA12BQ96MM6 686 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 KCNK16Q96T55 309 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 CCSER2Q9H7U1 834 aa21.71■■□□□ 1.07
VPS36-203ENST00000475375 ADAMTS9Q9P2N4 1935 aa21.7■■□□□ 1.07
VPS36-203ENST00000475375 PLXND1Q9Y4D7 1925 aa21.7■■□□□ 1.07
VPS36-203ENST00000475375 MYO18AQ92614 2054 aaKnown RBP21.7■■□□□ 1.06
VPS36-203ENST00000475375 A0A087X0B3 334 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 IGHV1OR15-9A0A0B4J2B8 117 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 TRIM24O15164 1050 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 NDUFS2O75306 463 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 ZNF217O75362 1048 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 FAM163BP0C2L3 166 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 CYP2J2P51589 502 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 EGFLAMQ63HQ2 1017 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 MIB1Q86YT6 1006 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 CHPFQ8IZ52 775 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 RGL4Q8IZJ4 473 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 TRIML1Q8N9V2 468 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 CGRRF1Q99675 332 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 DNAJC17Q9NVM6 304 aaKnown RBP21.7■■□□□ 1.06
VPS36-203ENST00000475375 PCDHB9Q9Y5E1 797 aa21.7■■□□□ 1.06
VPS36-203ENST00000475375 CD59P13987 128 aa21.69■■□□□ 1.06
VPS36-203ENST00000475375 SLC5A3P53794 718 aa21.69■■□□□ 1.06
VPS36-203ENST00000475375 MYL6P60660 151 aa21.69■■□□□ 1.06
VPS36-203ENST00000475375 HNRNPDQ14103 355 aaKnown RBP21.69■■□□□ 1.06
VPS36-203ENST00000475375 PLEKHG6Q3KR16 790 aa21.69■■□□□ 1.06
VPS36-203ENST00000475375 FAM173BQ6P4H8 233 aa21.69■■□□□ 1.06
VPS36-203ENST00000475375 SLC41A1Q8IVJ1 513 aa21.69■■□□□ 1.06
VPS36-203ENST00000475375 CAMK1GQ96NX5 476 aa21.69■■□□□ 1.06
VPS36-203ENST00000475375 GMIPQ9P107 970 aa21.69■■□□□ 1.06
VPS36-203ENST00000475375 A0A1W2PQF6 199 aa21.68■■□□□ 1.06
VPS36-203ENST00000475375 NEDD8-MDP1E9PL57 170 aa21.68■■□□□ 1.06
VPS36-203ENST00000475375 PHACTR2O75167 634 aa21.68■■□□□ 1.06
VPS36-203ENST00000475375 NDUFV2P19404 249 aa21.68■■□□□ 1.06
VPS36-203ENST00000475375 PSMD6Q15008 389 aa21.68■■□□□ 1.06
VPS36-203ENST00000475375 TRIP6Q15654 476 aaKnown RBP21.68■■□□□ 1.06
VPS36-203ENST00000475375 FAM35AQ86V20 835 aa21.68■■□□□ 1.06
VPS36-203ENST00000475375 SCFD1Q8WVM8 642 aa21.68■■□□□ 1.06
VPS36-203ENST00000475375 DMAP1Q9NPF5 467 aaPredicted RBP21.68■■□□□ 1.06
VPS36-203ENST00000475375 A0A1W2PQD8 194 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 CLIC2O15247 247 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 SH3BP5O60239 455 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 PDCP20941 246 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 HOXD13P35453 343 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 TUBP50607 506 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 CYP24A1Q07973 514 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 SYCP2LQ5T4T6 812 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 RAB44Q7Z6P3 723 aaPredicted RBP21.67■■□□□ 1.06
VPS36-203ENST00000475375 IPO4Q8TEX9 1081 aaKnown RBP21.67■■□□□ 1.06
VPS36-203ENST00000475375 WBP2Q969T9 261 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 SYAP1Q96A49 352 aaPredicted RBP21.67■■□□□ 1.06
VPS36-203ENST00000475375 XPO6Q96QU8 1125 aaKnown RBP21.67■■□□□ 1.06
VPS36-203ENST00000475375 ACOX2Q99424 681 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 BBS2Q9BXC9 721 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 LRRC27Q9C0I9 530 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 SMYD3Q9H7B4 428 aa21.67■■□□□ 1.06
VPS36-203ENST00000475375 UPF2Q9HAU5 1272 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms