RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PICK1Q9NRD5 415 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ABCD2Q9UBJ2 740 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ZFP69BQ9UJL9 534 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 LZTS1Q9Y250 596 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 PLLPQ9Y342 182 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 PCDHGA11Q9Y5H2 935 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 AK5Q9Y6K8 562 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 FAM159BA6NKW6 160 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 C9IYK1 514 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ATP5J2-PTCD1G3V325 749 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 H3BSA7 217 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 MAP3K7O43318 606 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 AKAP10O43572 662 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SNAP91O60641 907 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 PTCD1O75127 700 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 SERPINB3P29508 390 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 RFC1P35251 1148 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 IL9RQ01113 521 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 KRT17Q04695 432 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SEMA5AQ13591 1074 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 DPYSQ14117 519 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SPARCL1Q14515 664 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 DDR2Q16832 855 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SKIDA1Q1XH10 827 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 DNAL1Q4LDG9 190 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 CFAP157Q5JU67 520 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 INTS5Q6P9B9 1019 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 PEX26Q7Z412 305 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 NEK8Q86SG6 692 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ADAMTSL2Q86TH1 951 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 IGDCC3Q8IVU1 814 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ADGRF2Q8IZF7 708 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SYNE4Q8N205 404 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 FBXW8Q8N3Y1 598 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 DCLK2Q8N568 766 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 PACRGLQ8N7B6 248 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 MAGEB6Q8N7X4 407 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 USP33Q8TEY7 942 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ZNF566Q969W8 418 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 TMIGD2Q96BF3 282 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ABHD8Q96I13 439 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 FRMD8P1Q9BZ68 369 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 PDLIM7Q9NR12 457 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 MOCS1Q9NZB8 636 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 NPAP1Q9NZP6 1156 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ARPP21Q9UBL0 812 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 STK39Q9UEW8 545 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 STX8Q9UNK0 236 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 CD2APQ9Y5K6 639 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 STYXL1Q9Y6J8 313 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 STBD1O95210 358 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 GLRA2P23416 452 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 RPA1P27694 616 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 NMT1P30419 496 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 ADSLP30566 484 aaPredicted RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 POLR2IP36954 125 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 STT3AP46977 705 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PLTPP55058 493 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 GJB7Q6PEY0 223 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PAOXQ6QHF9 649 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 C19orf48Q6RUI8 117 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 EPGNQ6UW88 154 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 SEZ6L2Q6UXD5 910 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 HACD2Q6Y1H2 254 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CYHR1Q6ZMK1 362 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ANKRD35Q8N283 1001 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ELMOD1Q8N336 334 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 FAM181AQ8N9Y4 354 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 SLC20A1Q8WUM9 679 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 FAF2Q96CS3 445 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 SLC29A1Q99808 456 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 TMEM165Q9HC07 324 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 SMYD2Q9NRG4 433 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PRPF19Q9UMS4 504 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 HEMK1Q9Y5R4 338 aaPredicted RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 CPQQ9Y646 472 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ANKRD34BA5PLL1 514 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 KBTBD13C9JR72 458 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 UPK1AO00322 258 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 MSI1O43347 362 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 ONECUT3O60422 494 aaPredicted RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 USP1O94782 785 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 TNFAIP8O95379 198 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 WEE2P0C1S8 567 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ADRA1DP25100 572 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CD6P30203 668 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CRHR1P34998 444 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CASP4P49662 377 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 AMPD3Q01432 767 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 SLC25A11Q02978 314 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 CYLC2Q14093 348 aaPredicted RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 SELPLGQ14242 412 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 PDK1Q15118 436 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CTF1Q16619 201 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 DPY19L1Q2PZI1 675 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 SIGIRRQ6IA17 410 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 CENPUQ71F23 418 aa4.27□□□□□ -1.73
USP16-205ENST00000474835 ALYREFQ86V81 257 aaKnown RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 PHF13Q86YI8 300 aaPredicted RBP4.27□□□□□ -1.73
USP16-205ENST00000474835 ARHGEF19Q8IW93 802 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms