RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 OLIG1Q8TAK6 271 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 CLEC4CQ8WTT0 213 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 NDRG1Q92597 394 aaKnown RBP16.55■□□□□ 0.24
COL1A1-204ENST00000474644 SYN2Q92777 582 aaPredicted RBP16.55■□□□□ 0.24
COL1A1-204ENST00000474644 PPP1R13BQ96KQ4 1090 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 NOX5Q96PH1 765 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 SLC22A12Q96S37 553 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 AGPAT1Q99943 283 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 SYT11Q9BT88 431 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 SMG9Q9H0W8 520 aaKnown RBP16.55■□□□□ 0.24
COL1A1-204ENST00000474644 NUCKS1Q9H1E3 243 aaKnown RBP16.55■□□□□ 0.24
COL1A1-204ENST00000474644 CCSER2Q9H7U1 834 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 TRPV4Q9HBA0 871 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 LIMD1Q9UGP4 676 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 NAGPAQ9UK23 515 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 NUMBLQ9Y6R0 609 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 MYH10P35580 1976 aa16.55■□□□□ 0.24
COL1A1-204ENST00000474644 FAM170AA1A519 330 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 FBXO21O94952 628 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 CYP1A1P04798 512 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-204ENST00000474644 CKMP06732 381 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 ASGR2P07307 311 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 PFKLP17858 780 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 AVPR1AP37288 418 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 YWHAGP61981 247 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL1A1-204ENST00000474644 PTPN20Q4JDL3 420 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 HECTD3Q5T447 861 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 NAA35Q5VZE5 725 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 TRIM72Q6ZMU5 477 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 ARID3BQ8IVW6 561 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-204ENST00000474644 ARHGAP18Q8N392 663 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 ARL14EPQ8N8R7 260 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-204ENST00000474644 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
COL1A1-204ENST00000474644 RSAD2Q8WXG1 361 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 IRGQQ8WZA9 623 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 CYP2S1Q96SQ9 504 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 PCDHB18PQ96TA0 734 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 KXD1Q9BQD3 176 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 MIS12Q9H081 205 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 KCNK12Q9HB15 430 aa16.54■□□□□ 0.24
COL1A1-204ENST00000474644 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL1A1-204ENST00000474644 ZNF638Q14966 1978 aaKnown RBP16.54■□□□□ 0.24
COL1A1-204ENST00000474644 YJEFN3A6XGL0 299 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 E7ENQ6 273 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 PAPSS1O43252 624 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-204ENST00000474644 COCHO43405 550 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 TLR5O60602 858 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 MFAP3LO75121 409 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 ECI2O75521 394 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 ERBB2P04626 1255 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 HDCP19113 662 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 VIPR2P41587 438 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 PSEN1P49768 467 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 KLHL30Q0D2K2 578 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 TBX2Q13207 712 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-204ENST00000474644 HGSNATQ68CP4 663 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 TANGO2Q6ICL3 276 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 RNF135Q8IUD6 432 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 SCUBE3Q8IX30 993 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 USP13Q92995 863 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-204ENST00000474644 RSPRY1Q96DX4 576 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 DNAJC7Q99615 494 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 HAUS4Q9H6D7 363 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 SYNCQ9H7C4 482 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 CLIC5Q9NZA1 410 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 IGSF9Q9P2J2 1179 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 CCL26Q9Y258 94 aa16.53■□□□□ 0.24
COL1A1-204ENST00000474644 NUP210Q8TEM1 1887 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 SART1O43290 800 aaKnown RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 TPM1P09493 284 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 SKILP12757 684 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 UNGP13051 313 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 RARGP13631 454 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 GOLGA8FQ08AF8 430 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 GOLGA8DPQ0D2H9 430 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 ZNF268Q14587 947 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 ARID5BQ14865 1188 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 CLEC16AQ2KHT3 1053 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 TDRD12Q587J7 1177 aaKnown RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 HFE2Q6ZVN8 426 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 ZNF571Q7Z3V5 609 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 CPA5Q8WXQ8 436 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 ELSPBP1Q96BH3 223 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 PIWIL1Q96J94 861 aaKnown RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 RPP25Q9BUL9 199 aaKnown RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 RNF38Q9H0F5 515 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 ZFP14Q9HCL3 533 aa16.52■□□□□ 0.24
COL1A1-204ENST00000474644 SEPT11Q9NVA2 429 aaKnown RBP16.52■□□□□ 0.24
COL1A1-204ENST00000474644 DENND4CQ5VZ89 1909 aa16.52■□□□□ 0.23
COL1A1-204ENST00000474644 ANAPC1Q9H1A4 1944 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 SERPING1P05155 500 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 RALAP11233 206 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 HNRNPH3P31942 346 aaKnown RBP16.51■□□□□ 0.23
COL1A1-204ENST00000474644 SNX16P57768 344 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 SLC7A9P82251 487 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 CENPCQ03188 943 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 BSPRYQ5W0U4 402 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 FAM183BPQ6ZVS7 135 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 ERICH1Q86X53 443 aa16.51■□□□□ 0.23
COL1A1-204ENST00000474644 CELF5Q8N6W0 485 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms