RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 WBP2Q969T9 261 aa18.92■□□□□ 0.62
UPF3A-203ENST00000474056 NT5C1BQ96P26 610 aa18.92■□□□□ 0.62
UPF3A-203ENST00000474056 NMUR1Q9HB89 426 aa18.92■□□□□ 0.62
UPF3A-203ENST00000474056 GPR179Q6PRD1 2367 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 A0A1W2PQH9 124 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 P4HA2O15460 535 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 LILRB5O75023 590 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 TBX18O95935 607 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 TBXAS1P24557 533 aaPredicted RBP18.91■□□□□ 0.62
UPF3A-203ENST00000474056 HOXC13P31276 330 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 YWHAEP62258 255 aaKnown RBP18.91■□□□□ 0.62
UPF3A-203ENST00000474056 KCNH2Q12809 1159 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 PPP2R5DQ14738 602 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 GAB4Q2WGN9 574 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 TTC30AQ86WT1 665 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 ADGRG2Q8IZP9 1017 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 KIAA1958Q8N8K9 716 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 EZH1Q92800 747 aaPredicted RBP18.91■□□□□ 0.62
UPF3A-203ENST00000474056 KAT5Q92993 513 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 MED15Q96RN5 788 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 NACA2Q9H009 215 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 CLSTN2Q9H4D0 955 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 GVINP1Q7Z2Y8 2422 aa18.91■□□□□ 0.62
UPF3A-203ENST00000474056 RALGAPA1Q6GYQ0 2036 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 K7ESF4 209 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 SLC9A3R1O14745 358 aaPredicted RBP18.9■□□□□ 0.62
UPF3A-203ENST00000474056 RNF40O75150 1001 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 PAPSS2O95340 614 aaPredicted RBP18.9■□□□□ 0.62
UPF3A-203ENST00000474056 GNA14O95837 355 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 IRF1P10914 325 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 DRD1P21728 446 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 OPRD1P41143 372 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 DMWDQ09019 674 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 DHCR24Q15392 516 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 GOLGA7BQ2TAP0 167 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 SGO2Q562F6 1265 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 CCDC186Q7Z3E2 898 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 PIGZQ86VD9 579 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 PPM1KQ8N3J5 372 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 ANKRD52Q8NB46 1076 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 SUMF1Q8NBK3 374 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 ATRIPQ8WXE1 791 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 FAM126AQ9BYI3 521 aaPredicted RBP18.9■□□□□ 0.62
UPF3A-203ENST00000474056 CYLDQ9NQC7 956 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 RWDD2AQ9UIY3 292 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 NUDT5Q9UKK9 219 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 TSPAN16Q9UKR8 245 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 SH3BP1Q9Y3L3 701 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 USP3Q9Y6I4 520 aa18.9■□□□□ 0.62
UPF3A-203ENST00000474056 E2F8A0AVK6 867 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 TULP2O00295 520 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 MDM4O15151 490 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 AFPP02771 609 aaKnown RBP18.89■□□□□ 0.61
UPF3A-203ENST00000474056 RARGP13631 454 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 CD19P15391 556 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 CETN1Q12798 172 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 RAB41Q5JT25 222 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 RHBDF2Q6PJF5 856 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 TMEM270Q6UE05 265 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 SCD5Q86SK9 330 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 ARHGEF19Q8IW93 802 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.89■□□□□ 0.61
UPF3A-203ENST00000474056 TBC1D14Q9P2M4 693 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 NAGPAQ9UK23 515 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 PCDHB4Q9Y5E5 795 aa18.89■□□□□ 0.61
UPF3A-203ENST00000474056 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.89■□□□□ 0.61
UPF3A-203ENST00000474056 CFAP54Q96N23 3096 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 FGFR1OPO95684 399 aaKnown RBP18.88■□□□□ 0.61
UPF3A-203ENST00000474056 CCDC192P0DO97 292 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 VDRP11473 427 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 ATP5C1P36542 298 aaKnown RBP18.88■□□□□ 0.61
UPF3A-203ENST00000474056 BCAT1P54687 386 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 NRLP54845 237 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 PDE4CQ08493 712 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 CLEC17AQ6ZS10 378 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 RRAGAQ7L523 313 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 C12orf40Q86WS4 652 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 BBS7Q8IWZ6 715 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 EHBP1Q8NDI1 1231 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 EXOC4Q96A65 974 aa18.88■□□□□ 0.61
UPF3A-203ENST00000474056 CNOT6LQ96LI5 555 aaKnown RBP18.88■□□□□ 0.61
UPF3A-203ENST00000474056 KLF16Q9BXK1 252 aaPredicted RBP18.88■□□□□ 0.61
UPF3A-203ENST00000474056 POLR3BQ9NW08 1133 aaPredicted RBP18.88■□□□□ 0.61
UPF3A-203ENST00000474056 CHURC1-FNTBB4DL54 471 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 RNF225M0QZC1 329 aaPredicted RBP18.87■□□□□ 0.61
UPF3A-203ENST00000474056 GREM1O60565 184 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 FNTBP49356 437 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 BST2Q10589 180 aaKnown RBP18.87■□□□□ 0.61
UPF3A-203ENST00000474056 FBXO43Q4G163 708 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 SDK1Q7Z5N4 2213 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 RPLP0P6Q8NHW5 317 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 TFAP2BQ92481 460 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 OTUB2Q96DC9 234 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 UBXN6Q9BZV1 441 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 EPC1Q9H2F5 836 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 LMBRD1Q9NUN5 540 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 HESX1Q9UBX0 185 aa18.87■□□□□ 0.61
UPF3A-203ENST00000474056 ANTXRLA6NF34 631 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 O00370 1275 aa18.86■□□□□ 0.61
UPF3A-203ENST00000474056 XPO1O14980 1071 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms