RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 MYL5Q02045 173 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 FZD5Q13467 585 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 RUNX3Q13761 415 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 KRT31Q15323 416 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 ITPRIPL2Q3MIP1 535 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 CC2D1AQ6P1N0 951 aaPredicted RBP19.94■□□□□ 0.78
PTCD3-210ENST00000473829 ENOSF1Q7L5Y1 443 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 BHLHA9Q7RTU4 235 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 OSCP1Q8WVF1 389 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 FAM3CQ92520 227 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 SHC3Q92529 594 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 HSD3B7Q9H2F3 369 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 CYLDQ9NQC7 956 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 DUS2Q9NX74 493 aaKnown RBP19.94■□□□□ 0.78
PTCD3-210ENST00000473829 CFAP97Q9P2B7 532 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 NUDT5Q9UKK9 219 aa19.94■□□□□ 0.78
PTCD3-210ENST00000473829 NDRG2Q9UN36 371 aaKnown RBP19.94■□□□□ 0.78
PTCD3-210ENST00000473829 M0QYV0 167 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 PES1O00541 588 aaKnown RBP19.93■□□□□ 0.78
PTCD3-210ENST00000473829 GALR2O43603 387 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-210ENST00000473829 SETSIPP0DME0 302 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 PLA2G4AP47712 749 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 TKTL1P51854 596 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 MLLT6P55198 1093 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-210ENST00000473829 SLC8A3P57103 927 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 PDGFRLQ15198 375 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 CNGA2Q16280 664 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 KLHL40Q2TBA0 621 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 EML3Q32P44 896 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 DTWD2Q8NBA8 298 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 NDRG1Q92597 394 aaKnown RBP19.93■□□□□ 0.78
PTCD3-210ENST00000473829 SECISBP2LQ93073 1101 aaKnown RBP19.93■□□□□ 0.78
PTCD3-210ENST00000473829 WBP2Q969T9 261 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 OSBPL6Q9BZF3 934 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 ULBP1Q9BZM6 244 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 KCNH6Q9H252 994 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 VPS16Q9H269 839 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 LINC00597Q9H2U6 94 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 C8orf33Q9H7E9 229 aaPredicted RBP19.93■□□□□ 0.78
PTCD3-210ENST00000473829 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.93■□□□□ 0.78
PTCD3-210ENST00000473829 DNAJC12Q9UKB3 198 aa19.93■□□□□ 0.78
PTCD3-210ENST00000473829 MAN2B1O00754 1011 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 MDM4O15151 490 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 PNMA6AP0CW24 399 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-210ENST00000473829 RARGP13631 454 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 IFNAR2P48551 515 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 ADIGQ0VDE8 80 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 ANO6Q4KMQ2 910 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 NAIF1Q69YI7 327 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-210ENST00000473829 AOPEPQ8N6M6 819 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 SLC35F5Q8WV83 523 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 FUCA2Q9BTY2 467 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 NAGPAQ9UK23 515 aa19.92■□□□□ 0.78
PTCD3-210ENST00000473829 ARIH1Q9Y4X5 557 aaPredicted RBP19.92■□□□□ 0.78
PTCD3-210ENST00000473829 ZNF18P17022 549 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 RGS7P49802 495 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 NUBP1P53384 320 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 STILQ15468 1287 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 PM20D1Q6GTS8 502 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 PMF1Q6P1K2 205 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 RALGPS2Q86X27 583 aaPredicted RBP19.91■□□□□ 0.78
PTCD3-210ENST00000473829 KCTD13Q8WZ19 329 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 CLDN23Q96B33 292 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 MSANTD3Q96H12 275 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 FAM81BQ96LP2 452 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 NACA2Q9H009 215 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 ECT2Q9H8V3 914 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 MRPS17Q9Y2R5 130 aaKnown RBP19.91■□□□□ 0.78
PTCD3-210ENST00000473829 FHOD1Q9Y613 1164 aa19.91■□□□□ 0.78
PTCD3-210ENST00000473829 PIK3R2O00459 728 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 LETM1O95202 739 aaPredicted RBP19.9■□□□□ 0.78
PTCD3-210ENST00000473829 ZBED1O96006 694 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 IRF1P10914 325 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 GNA15P30679 374 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 USP8P40818 1118 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 KLK7P49862 253 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 PON2Q15165 354 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 DENND1BQ6P3S1 775 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 DDX42Q86XP3 938 aaKnown RBP eCLIP19.9■□□□□ 0.78
PTCD3-210ENST00000473829 ATP2A3Q93084 1043 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 NELL2Q99435 816 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 PRRX2Q99811 253 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 LSM14BQ9BX40 385 aaKnown RBP19.9■□□□□ 0.78
PTCD3-210ENST00000473829 KLF16Q9BXK1 252 aaPredicted RBP19.9■□□□□ 0.78
PTCD3-210ENST00000473829 LRRC4Q9HBW1 653 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 CLIC5Q9NZA1 410 aa19.9■□□□□ 0.78
PTCD3-210ENST00000473829 FOXN3O00409 490 aaPredicted RBP19.89■□□□□ 0.77
PTCD3-210ENST00000473829 THAP12O43422 761 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 GREM1O60565 184 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 CHRNB1P11230 501 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 LCP1P13796 627 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 GJA4P35212 333 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 ATP5C1P36542 298 aaKnown RBP19.89■□□□□ 0.77
PTCD3-210ENST00000473829 GPD2P43304 727 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 PSEN1P49768 467 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 YWHAGP61981 247 aaKnown RBP eCLIP19.89■□□□□ 0.77
PTCD3-210ENST00000473829 C10orf120Q5SQS8 335 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 KLHDC7AQ5VTJ3 777 aa19.89■□□□□ 0.77
PTCD3-210ENST00000473829 APTXQ7Z2E3 356 aaKnown RBP19.89■□□□□ 0.77
PTCD3-210ENST00000473829 CPA6Q8N4T0 437 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms