RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 TTC16Q8NEE8 873 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 MDGA1Q8NFP4 955 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 SPACA7Q96KW9 195 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 MED10Q9BTT4 135 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 IMPG2Q9BZV3 1241 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 SPHK2Q9NRA0 654 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 MARK1Q9P0L2 795 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 DEC1Q9P2X7 70 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 CHORDC1Q9UHD1 332 aaPredicted RBP14.33□□□□□ -0.12
CHD3-209ENST00000473376 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 SCML2Q9UQR0 700 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 PCDHA5Q9Y5H7 936 aa14.33□□□□□ -0.12
CHD3-209ENST00000473376 KHNYNO15037 678 aaKnown RBP14.32□□□□□ -0.12
CHD3-209ENST00000473376 RHOBTB3O94955 611 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 RPL13P26373 211 aaKnown RBP14.32□□□□□ -0.12
CHD3-209ENST00000473376 GBP1P32455 592 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 GTF2H1P32780 548 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 CREB5Q02930 508 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 DNM1Q05193 864 aaKnown RBP14.32□□□□□ -0.12
CHD3-209ENST00000473376 E2F5Q15329 346 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 ANO7Q6IWH7 933 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 LPCAT2Q7L5N7 544 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 TADA2BQ86TJ2 420 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 ACOT1Q86TX2 421 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 ZMIZ2Q8NF64 920 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 CDK5RAP1Q96SZ6 601 aaKnown RBP14.32□□□□□ -0.12
CHD3-209ENST00000473376 SMOQ99835 787 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 KRT82Q9NSB4 513 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 RXFP3Q9NSD7 469 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 POLR3BQ9NW08 1133 aaPredicted RBP14.32□□□□□ -0.12
CHD3-209ENST00000473376 WDR35Q9P2L0 1181 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 ANGPTL2Q9UKU9 493 aa14.32□□□□□ -0.12
CHD3-209ENST00000473376 GREM1O60565 184 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 TLR5O60602 858 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 KCNK5O95279 499 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 FAM200BP0CF97 657 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 PFKFB1P16118 471 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 CSRP1P21291 193 aaKnown RBP14.31□□□□□ -0.12
CHD3-209ENST00000473376 ATP5C1P36542 298 aaKnown RBP14.31□□□□□ -0.12
CHD3-209ENST00000473376 ASPAP45381 313 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 SLC6A11P48066 632 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 VAMP7P51809 220 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 NDST1P52848 882 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 SEC13P55735 322 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 LMAN2Q12907 356 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 N4BP2L1Q5TBK1 243 aaPredicted RBP14.31□□□□□ -0.12
CHD3-209ENST00000473376 PEAR1Q5VY43 1037 aaPredicted RBP14.31□□□□□ -0.12
CHD3-209ENST00000473376 TMEM92Q6UXU6 159 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 GUF1Q8N442 669 aaKnown RBP14.31□□□□□ -0.12
CHD3-209ENST00000473376 ALLCQ8N6M5 410 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 TXNDC5Q8NBS9 432 aaKnown RBP14.31□□□□□ -0.12
CHD3-209ENST00000473376 SLC2A14Q8TDB8 520 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 CCDC34Q96HJ3 373 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 EDEM2Q9BV94 578 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 NT5C1AQ9BXI3 368 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 KLF16Q9BXK1 252 aaPredicted RBP14.31□□□□□ -0.12
CHD3-209ENST00000473376 UBXN6Q9BZV1 441 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 NACA2Q9H009 215 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 SDCBP2Q9H190 292 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHD3-209ENST00000473376 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 KIAA1549LQ6ZVL6 1849 aa14.31□□□□□ -0.12
CHD3-209ENST00000473376 CNOT1A5YKK6 2376 aaKnown RBP14.31□□□□□ -0.12
CHD3-209ENST00000473376 A0A1W2PQ27 194 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 A0A1W2PQ64 194 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 A0A1W2PQD8 194 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 LNP1A1A4G5 178 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 TBC1D3BA6NDS4 549 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 SGK1O00141 431 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 GFRA2O00451 464 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 DCLK1O15075 740 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 NPC1O15118 1278 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 CACNG3O60359 315 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 ADAM23O75077 832 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 TULP3O75386 442 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 KLF8O95600 359 aaPredicted RBP14.3□□□□□ -0.12
CHD3-209ENST00000473376 CEACAM1P13688 526 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 PLA2G4AP47712 749 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 ZNF132P52740 706 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 DLG4P78352 724 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 KRT85P78386 507 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 C1orf220Q5T0J3 134 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 SLC36A4Q6YBV0 504 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 CYP2U1Q7Z449 544 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 RABEPKQ7Z6M1 372 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 C12orf40Q86WS4 652 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 SYT12Q8IV01 421 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 BBS7Q8IWZ6 715 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 CCDC33Q8N5R6 958 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 TERB1Q8NA31 727 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 CCDC150Q8NCX0 1101 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 XPO6Q96QU8 1125 aaKnown RBP14.3□□□□□ -0.12
CHD3-209ENST00000473376 SCAND2PQ9GZW5 306 aaPredicted RBP14.3□□□□□ -0.12
CHD3-209ENST00000473376 CCSER2Q9H7U1 834 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 TMEM9BQ9NQ34 198 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 CLIC5Q9NZA1 410 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 GMIPQ9P107 970 aa14.3□□□□□ -0.12
CHD3-209ENST00000473376 LSM7Q9UK45 103 aaKnown RBP14.3□□□□□ -0.12
CHD3-209ENST00000473376 ZNF510Q9Y2H8 683 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms