RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	SLC6A14	Q9UN76	642 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	GON4L	Q3T8J9	2241 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	CELSR3	Q9NYQ7	3312 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	ADAMTS20	P59510	1910 aa		10.23	□□□□□ -0.77
MCF2L-223	ENST00000473345	E2F8	A0AVK6	867 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	TBC1D3B	A6NDS4	549 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	ARHGAP33	O14559	1287 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	TACC1	O75410	805 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	ALDH1A2	O94788	518 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	CISD3	P0C7P0	127 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	IRF1	P10914	325 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	HOXB2	P14652	356 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	GAP43	P17677	238 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	PFKL	P17858	780 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	CASP1	P29466	404 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	GNL1	P36915	607 aa	Predicted RBP	10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	DUOXA1	Q1HG43	343 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	COL28A1	Q2UY09	1125 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	RRAGB	Q5VZM2	374 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	LARP1B	Q659C4	914 aa	Known RBP	10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	EPM2AIP1	Q7L775	607 aa	Predicted RBP	10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	GPRIN1	Q7Z2K8	1008 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	SYCP3	Q8IZU3	236 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	KIAA1958	Q8N8K9	716 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	B3GALNT2	Q8NCR0	500 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	OR6B3	Q8NGW1	331 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	MDM1	Q8TC05	714 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	IPO4	Q8TEX9	1081 aa	Known RBP	10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	FBXO32	Q969P5	355 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	EXOC4	Q96A65	974 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	ANKRD36BP1	Q96IX9	119 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	SPACA7	Q96KW9	195 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	MRGPRX1	Q96LB2	322 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	MMS19	Q96T76	1030 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	SMO	Q99835	787 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	POLM	Q9NP87	494 aa	Predicted RBP	10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	SPHK2	Q9NRA0	654 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	PANK4	Q9NVE7	773 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	CACNA2D2	Q9NY47	1150 aa		10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	SRPRB	Q9Y5M8	271 aa	Known RBP	10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	FASN	P49327	2511 aa	Known RBP	10.22	□□□□□ -0.77
MCF2L-223	ENST00000473345	FAM92A	A1XBS5	289 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	KCNJ18	B7U540	433 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	TRIM66	O15016	1216 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	MDM4	O15151	490 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	CLIC2	O15247	247 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	ADH1C	P00326	375 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	LDHA	P00338	332 aa	Known RBP	10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	FTH1P19	P0C7X4	201 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	ANXA13	P27216	316 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	YWHAQ	P27348	245 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	ABCD1	P33897	745 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	SLC5A3	P53794	718 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	CEBPZ	Q03701	1054 aa	Known RBP	10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	GAD2	Q05329	585 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	GFPT1	Q06210	699 aa	Predicted RBP	10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	RABEP1	Q15276	862 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	E2F4	Q16254	413 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	DUOXA2	Q1HG44	320 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	WDR72	Q3MJ13	1102 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	HSF5	Q4G112	596 aa	Predicted RBP	10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	SPDYC	Q5MJ68	293 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	SNX30	Q5VWJ9	437 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	TDRD10	Q5VZ19	366 aa	Known RBP	10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	SV2B	Q7L1I2	683 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	FAM35A	Q86V20	835 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	WDR49	Q8IV35	697 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	FUK	Q8N0W3	1084 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	NUP93	Q8N1F7	819 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	ADAMTS14	Q8WXS8	1223 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	CEP295NL	Q96MC4	621 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	USP28	Q96RU2	1077 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	GABRG3	Q99928	467 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	KLF16	Q9BXK1	252 aa	Predicted RBP	10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	SLC32A1	Q9H598	525 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	NUDT5	Q9UKK9	219 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	CLEC4E	Q9ULY5	219 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	EXOC7	Q9UPT5	735 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	STARD13	Q9Y3M8	1113 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	PCDHB13	Q9Y5F0	798 aa		10.21	□□□□□ -0.77
MCF2L-223	ENST00000473345	SMG1	Q96Q15	3661 aa	Known RBP	10.21	□□□□□ -0.78
MCF2L-223	ENST00000473345	CEP192	Q8TEP8	1941 aa		10.21	□□□□□ -0.78
MCF2L-223	ENST00000473345	ZNF233	A6NK53	670 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	HHLA1	C9JL84	531 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	SLC9A3R1	O14745	358 aa	Predicted RBP	10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	AP5Z1	O43299	807 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	OPHN1	O60890	802 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	VNN1	O95497	513 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	DLAT	P10515	647 aa	Known RBP	10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	CCDC130	P13994	396 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	NTSR1	P30989	418 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	HOXD12	P35452	270 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	PI4KA	P42356	2102 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	PDE6C	P51160	858 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	CYP24A1	Q07973	514 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	MYO1E	Q12965	1108 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	GRIK2	Q13002	908 aa		10.2	□□□□□ -0.78
MCF2L-223	ENST00000473345	TRIP6	Q15654	476 aa	Known RBP	10.2	□□□□□ -0.78

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