RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 CMASQ8NFW8 434 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-206ENST00000472815 SPPL2BQ8TCT7 592 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 CENPIQ92674 756 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-206ENST00000472815 TMEM209Q96SK2 561 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 MAK16Q9BXY0 300 aaKnown RBP15.27■□□□□ 0.04
HIF3A-206ENST00000472815 GPR62Q9BZJ7 368 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 IL23AQ9NPF7 189 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 TMLHEQ9NVH6 421 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 ABI2Q9NYB9 513 aaPredicted RBP15.27■□□□□ 0.04
HIF3A-206ENST00000472815 STK39Q9UEW8 545 aa15.27■□□□□ 0.04
HIF3A-206ENST00000472815 DMGDHQ9UI17 866 aaKnown RBP15.27■□□□□ 0.04
HIF3A-206ENST00000472815 HHLA1C9JL84 531 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 PI4K2BG5E9Z4 385 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 LTFP02788 710 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 RARAP10276 462 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 LAG3P18627 525 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 CDKN2BP42772 138 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 MAGEA11P43364 429 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 SULT1E1P49888 294 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 WDR5P61964 334 aaKnown RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 KLF1Q13351 362 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 KRT81Q14533 505 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 CCNG2Q16589 344 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 ATP13A4Q4VNC1 1196 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 TRNP1Q6NT89 227 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 SYDE1Q6ZW31 735 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 PSTKQ8IV42 348 aaKnown RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 DEFB106AQ8N104 65 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 HSPH1Q92598 858 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 ZNF558Q96NG5 402 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 SLC2A13Q96QE2 648 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 HEMGNQ9BXL5 484 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 EPB41L5Q9HCM4 733 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 KLHL11Q9NVR0 708 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 hCG_1818297A0A087WSY0 165 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 NT5C1B-RDH14C9J2C7 533 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 ATP8B1O43520 1251 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 ECEL1O95672 775 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 GAS8O95995 478 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 F9P00740 461 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 IL1R2P27930 398 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 COILP38432 576 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 AIF1P55008 147 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 TFDP2Q14188 446 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 BTG3Q14201 252 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 KCNT1Q5JUK3 1230 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 ERMARDQ5T6L9 678 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 KAZNQ674X7 775 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 PM20D1Q6GTS8 502 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 KIAA1841Q6NSI8 718 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 CCNI2Q6ZMN8 369 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 RAPGEF5Q92565 580 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 ZNF689Q96CS4 500 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 TMEM169Q96HH4 297 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 IGSF21Q96ID5 467 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 C8orf48Q96LL4 319 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 C11orf84Q9BUA3 381 aaPredicted RBP15.26■□□□□ 0.03
HIF3A-206ENST00000472815 CALN1Q9BXU9 219 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 FBXO44Q9H4M3 255 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 CWH43Q9H720 699 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 GDF3Q9NR23 364 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 AAASQ9NRG9 546 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 FAM114A2Q9NRY5 505 aa15.26■□□□□ 0.03
HIF3A-206ENST00000472815 ZNF487B1APH4 448 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 TTI1O43156 1089 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 USP17L7P0C7H9 530 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 RDXP35241 583 aaKnown RBP15.25■□□□□ 0.03
HIF3A-206ENST00000472815 NDUFV1P49821 464 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 CACNA2D1P54289 1103 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 EPHB4P54760 987 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 CDH6P55285 790 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 HDAC4P56524 1084 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 RBM10P98175 930 aaKnown RBP15.25■□□□□ 0.03
HIF3A-206ENST00000472815 GPR17Q13304 367 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 SIX1Q15475 284 aaPredicted RBP15.25■□□□□ 0.03
HIF3A-206ENST00000472815 TXNRD3NBQ6F5E7 133 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 KCNT2Q6UVM3 1135 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 SND1Q7KZF4 910 aaKnown RBP eCLIP15.25■□□□□ 0.03
HIF3A-206ENST00000472815 BEND5Q7L4P6 421 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 SCN4BQ8IWT1 228 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.25■□□□□ 0.03
HIF3A-206ENST00000472815 HDAC7Q8WUI4 952 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 SLCO2A1Q92959 643 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 YME1L1Q96TA2 773 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 NR2E1Q9Y466 385 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 USP3Q9Y6I4 520 aa15.25■□□□□ 0.03
HIF3A-206ENST00000472815 TCRBV7S2A1N4TA0A589 114 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 NCAM1P13591 858 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 CYP2F1P24903 491 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 ITGB8P26012 769 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 PPM1AP35813 382 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 EMBQ6PCB8 327 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 GPRIN1Q7Z2K8 1008 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 C7orf61Q8IZ16 206 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 ARHGAP18Q8N392 663 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 ATL2Q8NHH9 583 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 DPF3Q92784 378 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 NT5C3BQ969T7 300 aa15.24■□□□□ 0.03
HIF3A-206ENST00000472815 VWCEQ96DN2 955 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms