RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ABCC13Q9NSE7 274 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 ASNSD1Q9NWL6 643 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 MYO1AQ9UBC5 1043 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 CHORDC1Q9UHD1 332 aaPredicted RBP17.69■□□□□ 0.42
CCM2-205ENST00000472223 CD207Q9UJ71 328 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 ZMYM5Q9UJ78 669 aa17.69■□□□□ 0.42
CCM2-205ENST00000472223 GREB1Q4ZG55 1949 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 PAPSS1O43252 624 aaPredicted RBP17.68■□□□□ 0.42
CCM2-205ENST00000472223 HSF2BPO75031 334 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 RHOP08100 348 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 CCDC175P0C221 793 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 KRT3P12035 628 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 RNASE9P60153 205 aaKnown RBP17.68■□□□□ 0.42
CCM2-205ENST00000472223 USP46P62068 366 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 YWHAZP63104 245 aaKnown RBP17.68■□□□□ 0.42
CCM2-205ENST00000472223 MTF1Q14872 753 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 XYLT1Q86Y38 959 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 C3orf20Q8ND61 904 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 HLA-CQ95604 372 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 NECTIN4Q96NY8 510 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 GMIPQ9P107 970 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 DNMT3BQ9UBC3 853 aaKnown RBP17.68■□□□□ 0.42
CCM2-205ENST00000472223 COG5Q9UP83 839 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 MRPS23Q9Y3D9 190 aaKnown RBP17.68■□□□□ 0.42
CCM2-205ENST00000472223 NCANO14594 1321 aa17.68■□□□□ 0.42
CCM2-205ENST00000472223 ZNF638Q14966 1978 aaKnown RBP17.68■□□□□ 0.42
CCM2-205ENST00000472223 MYO16Q9Y6X6 1858 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 FAM92AA1XBS5 289 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 LTFP02788 710 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 TMEM253P0C7T8 217 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 RRM1P23921 792 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 DDX6P26196 483 aaKnown RBP eCLIP17.67■□□□□ 0.42
CCM2-205ENST00000472223 GSCP56915 257 aaPredicted RBP17.67■□□□□ 0.42
CCM2-205ENST00000472223 CCZ1BP86790 482 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 CCZ1P86791 482 aaPredicted RBP17.67■□□□□ 0.42
CCM2-205ENST00000472223 KIF5AQ12840 1032 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 C2CD6Q53TS8 623 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 BSPRYQ5W0U4 402 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 SYCE2Q6PIF2 218 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 PHLDB2Q86SQ0 1253 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 HS6ST3Q8IZP7 471 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 ZNF707Q96C28 371 aaPredicted RBP17.67■□□□□ 0.42
CCM2-205ENST00000472223 MCRS1Q96EZ8 462 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 ZNF830Q96NB3 372 aaPredicted RBP17.67■□□□□ 0.42
CCM2-205ENST00000472223 THAP2Q9H0W7 228 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 POPDC2Q9HBU9 364 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 AVENQ9NQS1 362 aaPredicted RBP17.67■□□□□ 0.42
CCM2-205ENST00000472223 OLA1Q9NTK5 396 aaKnown RBP17.67■□□□□ 0.42
CCM2-205ENST00000472223 HCFC1R1Q9NWW0 138 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 CLIC5Q9NZA1 410 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 CLEC1BQ9P126 229 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 LCMT1Q9UIC8 334 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 CLUHO75153 1309 aa17.67■□□□□ 0.42
CCM2-205ENST00000472223 A0A1W2PQH9 124 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 ZSCAN12O43309 604 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 TBX10O75333 385 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 PAPLNO95428 1278 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 NCAM1P13591 858 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 KCNA5P22460 613 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 FSHRP23945 695 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 EPHA5P54756 1037 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 NAP1L1P55209 391 aaKnown RBP17.66■□□□□ 0.42
CCM2-205ENST00000472223 PTP4A2Q12974 167 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 COL19A1Q14993 1142 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 HECTD3Q5T447 861 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 OLFML1Q6UWY5 402 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 SLC26A9Q7LBE3 791 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 RHOT2Q8IXI1 618 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 CALR3Q96L12 384 aaKnown RBP17.66■□□□□ 0.42
CCM2-205ENST00000472223 TSGA10Q9BZW7 698 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 SLITRK6Q9H5Y7 841 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 UBE2ZQ9H832 354 aaPredicted RBP17.66■□□□□ 0.42
CCM2-205ENST00000472223 METTL5Q9NRN9 209 aaKnown RBP17.66■□□□□ 0.42
CCM2-205ENST00000472223 TMEM51Q9NW97 253 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 RRN3Q9NYV6 651 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCM2-205ENST00000472223 CTTNBP2NLQ9P2B4 639 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 TJP2Q9UDY2 1190 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 STAP1Q9ULZ2 295 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 FAM50BQ9Y247 325 aa17.66■□□□□ 0.42
CCM2-205ENST00000472223 A0A1W2PRU2 124 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 ZNF840PA6NDX5 716 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 SIGLEC16A6NMB1 481 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 YJEFN3A6XGL0 299 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 SOBPA7XYQ1 873 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 E7ENQ6 273 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 CCP110O43303 1012 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 GABBR2O75899 941 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 F11P03951 625 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 RARGP13631 454 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 PFKLP17858 780 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 NOP2P46087 812 aaKnown RBP17.65■□□□□ 0.42
CCM2-205ENST00000472223 VAV2P52735 878 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 CLUL1Q15846 466 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 IFI16Q16666 785 aaKnown RBP17.65■□□□□ 0.42
CCM2-205ENST00000472223 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 BEND5Q7L4P6 421 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 TMC8Q8IU68 726 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 ACRBPQ8NEB7 543 aa17.65■□□□□ 0.42
CCM2-205ENST00000472223 OLIG1Q8TAK6 271 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms