RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 TRAPPC12Q8WVT3 735 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 CCT6BQ92526 530 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 CTHRC1Q96CG8 243 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 POLR3GLQ9BT43 218 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 KATNAL1Q9BW62 490 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 TMEM120AQ9BXJ8 343 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 MYLK2Q9H1R3 596 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 MAGEH1Q9H213 219 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 TP63Q9H3D4 680 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-209ENST00000472044 CYP4F11Q9HBI6 524 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 RXFP3Q9NSD7 469 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 SERTAD4Q9NUC0 356 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 DKK3Q9UBP4 350 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 NKX1-2Q9UD57 310 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-209ENST00000472044 STEAP1Q9UHE8 339 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 SLC27A6Q9Y2P4 619 aa4.49□□□□□ -1.69
PTCD3-209ENST00000472044 MORC2Q9Y6X9 1032 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-209ENST00000472044 FNDC1Q4ZHG4 1894 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-209ENST00000472044 A8MVJ9 347 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 PSMD9O00233 223 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 EXOC5O00471 708 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 PCDH17O14917 1159 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 ZNF202O95125 648 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 FESP07332 822 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 CHRM2P08172 466 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 ADH4P08319 380 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 INSRRP14616 1297 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 TNFRSF1AP19438 455 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 PCSK6P29122 969 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 NTSR1P30989 418 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 FOXI1Q12951 378 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 EIF2B5Q13144 721 aaKnown RBP4.48□□□□□ -1.69
PTCD3-209ENST00000472044 C4orf46Q504U0 113 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 PLAC9Q5JTB6 97 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 MTHFD1LQ6UB35 978 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 Q6ZPA2 131 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 WDR53Q7Z5U6 358 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-209ENST00000472044 MYCT1Q8N699 235 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 STT3BQ8TCJ2 826 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 GRAMD1AQ96CP6 724 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 LTV1Q96GA3 475 aaPredicted RBP4.48□□□□□ -1.69
PTCD3-209ENST00000472044 PDLIM2Q96JY6 352 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 HAPLN3Q96S86 360 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 PRPF18Q99633 342 aaKnown RBP4.48□□□□□ -1.69
PTCD3-209ENST00000472044 PRRX2Q99811 253 aa4.48□□□□□ -1.69
PTCD3-209ENST00000472044 HERC5Q9UII4 1024 aaKnown RBP4.48□□□□□ -1.69
PTCD3-209ENST00000472044 KIAA0355O15063 1070 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 ZSCAN9O15535 394 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-209ENST00000472044 ASNA1O43681 348 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 PMPCBO75439 489 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 VNN1O95497 513 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 ANXA6P08133 673 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 ITGA2BP08514 1039 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 DLDP09622 509 aaKnown RBP4.47□□□□□ -1.69
PTCD3-209ENST00000472044 GKP32189 559 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 GRIA3P42263 894 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 CLCN2P51788 898 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 MTAPQ13126 283 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 CYP1B1Q16678 543 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 ST3GAL2Q16842 350 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 TRIM60Q495X7 471 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 ANKRD16Q6P6B7 361 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 CLEC9AQ6UXN8 241 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 LDHAL6AQ6ZMR3 332 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 PARS2Q7L3T8 475 aaKnown RBP4.47□□□□□ -1.69
PTCD3-209ENST00000472044 ZNF551Q7Z340 670 aaPredicted RBP4.47□□□□□ -1.69
PTCD3-209ENST00000472044 VRK3Q8IV63 474 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 NRSN1Q8IZ57 195 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 SLC44A3Q8N4M1 653 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 METTL25Q8N6Q8 603 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 AMER2Q8N7J2 671 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 SUPT20HQ8NEM7 779 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 TFAP2BQ92481 460 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 LARP4BQ92615 738 aaKnown RBP4.47□□□□□ -1.69
PTCD3-209ENST00000472044 R3HDM4Q96D70 268 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 TOR3AQ9H497 397 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 ARHGEF3Q9NR81 526 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 FOXJ2Q9P0K8 574 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 GRHPRQ9UBQ7 328 aa4.47□□□□□ -1.69
PTCD3-209ENST00000472044 SCAF8Q9UPN6 1271 aaKnown RBP4.47□□□□□ -1.69
PTCD3-209ENST00000472044 KAT6AQ92794 2004 aa4.46□□□□□ -1.69
PTCD3-209ENST00000472044 TMEM191CA6NGB0 347 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 TRIM38O00635 465 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 CREB3O43889 395 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 URI1O94763 535 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-209ENST00000472044 WDR47O94967 919 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 TNFRSF6BO95407 300 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 SRGAP2BP0DMP2 458 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 NR2F6P10588 404 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 JUPP14923 745 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 BUD31P41223 144 aaPredicted RBP4.46□□□□□ -1.7
PTCD3-209ENST00000472044 ALDH18A1P54886 795 aaKnown RBP4.46□□□□□ -1.7
PTCD3-209ENST00000472044 MRPS35P82673 323 aaKnown RBP4.46□□□□□ -1.7
PTCD3-209ENST00000472044 ABHD18Q0P651 414 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 RAPGEF1Q13905 1077 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 KCNJ12Q14500 433 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 LIN54Q6MZP7 749 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 Q6ZWC4 215 aa4.46□□□□□ -1.7
PTCD3-209ENST00000472044 ZNF627Q7L945 461 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms