RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TRIM66O15016 1216 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 RHOBTB3O94955 611 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 ZNF202O95125 648 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 FAM163BP0C2L3 166 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 TCF3P15923 654 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 WASP42768 502 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 SYKP43405 635 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 MAPRE1Q15691 268 aaKnown RBP8.56□□□□□ -1.04
USP48-207ENST00000471752 CSRP2Q16527 193 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 SGSM1Q2NKQ1 1148 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 ZCWPW2Q504Y3 356 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 ZNF394Q53GI3 561 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 PLA2G2CQ5R387 149 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 ATL3Q6DD88 541 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 ISM2Q6H9L7 571 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 CLEC20AQ6ZU45 233 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.56□□□□□ -1.04
USP48-207ENST00000471752 TTC30AQ86WT1 665 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 DEFB119Q8N690 84 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 IL17RCQ8NAC3 791 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 TXNDC5Q8NBS9 432 aaKnown RBP8.56□□□□□ -1.04
USP48-207ENST00000471752 TMC2Q8TDI7 906 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 ATP2A3Q93084 1043 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 SYAP1Q96A49 352 aaPredicted RBP8.56□□□□□ -1.04
USP48-207ENST00000471752 IER2Q9BTL4 223 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 KLF16Q9BXK1 252 aaPredicted RBP8.56□□□□□ -1.04
USP48-207ENST00000471752 MBD1Q9UIS9 605 aaPredicted RBP8.56□□□□□ -1.04
USP48-207ENST00000471752 RAB23Q9ULC3 237 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 TRAF3IP3Q9Y228 551 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 NBEAQ8NFP9 2946 aa8.56□□□□□ -1.04
USP48-207ENST00000471752 CACNA1EQ15878 2313 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 PTPRDP23468 1912 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 FAM92AA1XBS5 289 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 WASH3PC4AMC7 463 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 GIPC1O14908 333 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 CLSTN1O94985 981 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 EPN2O95208 641 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 KAT7O95251 611 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 KLF8O95600 359 aaPredicted RBP8.55□□□□□ -1.04
USP48-207ENST00000471752 KLKB1P03952 638 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 NR2F2P24468 414 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 KIR2DL1P43626 348 aaPredicted RBP8.55□□□□□ -1.04
USP48-207ENST00000471752 VAMP7P51809 220 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 DGKEP52429 567 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 FOXK2Q01167 660 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 ADAM9Q13443 819 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 HECTD3Q5T447 861 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 PPP1R26Q5T8A7 1209 aaPredicted RBP8.55□□□□□ -1.04
USP48-207ENST00000471752 SNX30Q5VWJ9 437 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 ANO7Q6IWH7 933 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 C1orf228Q6PIY5 440 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 TOGARAM2Q6ZUX3 1019 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 SYT13Q7L8C5 426 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 CACNA2D4Q7Z3S7 1137 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 ETFBKMTQ8IXQ9 262 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 ENGASEQ8NFI3 743 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 MDGA1Q8NFP4 955 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 TMEM174Q8WUU8 243 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 BHMTQ93088 406 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 SLC6A17Q9H1V8 727 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 CSNK1G1Q9HCP0 422 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 CD93Q9NPY3 652 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 FSCN3Q9NQT6 498 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 PLK2Q9NYY3 685 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 CGNQ9P2M7 1197 aaKnown RBP8.55□□□□□ -1.04
USP48-207ENST00000471752 ZMYM5Q9UJ78 669 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 CLEC4EQ9ULY5 219 aa8.55□□□□□ -1.04
USP48-207ENST00000471752 ZNF638Q14966 1978 aaKnown RBP8.55□□□□□ -1.04
USP48-207ENST00000471752 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 TRIM49BA6NDI0 452 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 PRR5-ARHGAP8B1AHC4 643 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 PRRT4C9JH25 899 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 SLC30A4O14863 429 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 IKBKBO14920 756 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 ATG13O75143 517 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 CILPO75339 1184 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 TULP3O75386 442 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 KRT37O76014 449 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 NFATC1O95644 943 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 TOP3BO95985 862 aaKnown RBP8.54□□□□□ -1.04
USP48-207ENST00000471752 ZNF806P0C7X5 589 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 CCDC192P0DO97 292 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 ACO1P21399 889 aaKnown RBP8.54□□□□□ -1.04
USP48-207ENST00000471752 CNR2P34972 360 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 PIK3CAP42336 1068 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 PRCPP42785 496 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 PTGER3P43115 390 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 MCCD1P59942 119 aaPredicted RBP8.54□□□□□ -1.04
USP48-207ENST00000471752 KRT85P78386 507 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 ARHGAP8P85298 464 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 LMNB2Q03252 620 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 PPP2R5DQ14738 602 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 CBWD6Q4V339 395 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 PPM1JQ5JR12 505 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 CBWD3Q5JTY5 395 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 CBWD5Q5RIA9 395 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 ANKRD40Q6AI12 368 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 TPGS1Q6ZTW0 290 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 ARMCX6Q7L4S7 300 aa8.54□□□□□ -1.04
USP48-207ENST00000471752 FAM186BQ8IYM0 893 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms