RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 SLC7A5Q01650 507 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 DR1Q01658 176 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 SMARCB1Q12824 385 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 CDO1Q16878 200 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 SLC25A52Q3SY17 297 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 MAP9Q49MG5 647 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 SLC39A12Q504Y0 691 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 TFDP3Q5H9I0 405 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 ZFYVE27Q5T4F4 411 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 SH3PXD2AQ5TCZ1 1133 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 OTUD1Q5VV17 481 aaPredicted RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 TTC27Q6P3X3 843 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 CCDC137Q6PK04 289 aaKnown RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 MFSD7Q6UXD7 560 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 ANKS3Q6ZW76 656 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 BEND5Q7L4P6 421 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 BHLHA9Q7RTU4 235 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 BNIPLQ7Z465 357 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 ANKS1BQ7Z6G8 1248 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 MTERF4Q7Z6M4 381 aaKnown RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 TMEM173Q86WV6 379 aaPredicted RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 VSIG1Q86XK7 387 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 IFT20Q8IY31 132 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 RNF168Q8IYW5 571 aaPredicted RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 DEFB106AQ8N104 65 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 CMASQ8NFW8 434 aaPredicted RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 BCL7CQ8WUZ0 217 aaPredicted RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 SEC14L1Q92503 715 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 RAPGEF5Q92565 580 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 NT5C3BQ969T7 300 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 MAGOHBQ96A72 148 aaKnown RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 FAM149B1Q96BN6 582 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 ACSF2Q96CM8 615 aaPredicted RBP9.81□□□□□ -0.84
VPS52-216ENST00000471309 NPY6RQ99463 290 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 RAB17Q9H0T7 212 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 ARFGAP3Q9NP61 516 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 IL23AQ9NPF7 189 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 PCSK1NQ9UHG2 260 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 RASAL2Q9UJF2 1139 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 MYO16Q9Y6X6 1858 aa9.81□□□□□ -0.84
VPS52-216ENST00000471309 YJEFN3A6XGL0 299 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 ZNF487B1APH4 448 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 E7ENQ6 273 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 TRIM66O15016 1216 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 TTI1O43156 1089 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 ENDOD1O94919 500 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 LTFP02788 710 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 OR4Q2P0C623 313 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 LAG3P18627 525 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 KDELR1P24390 212 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 COILP38432 576 aaPredicted RBP9.8□□□□□ -0.84
VPS52-216ENST00000471309 PBX3P40426 434 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 PTGIRP43119 386 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 NDUFV1P49821 464 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 SULT1E1P49888 294 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 ARSEP51690 589 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 DEFB103AP81534 67 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 RBM10P98175 930 aaKnown RBP9.8□□□□□ -0.84
VPS52-216ENST00000471309 GUCY2DQ02846 1103 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 GPR17Q13304 367 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 CUL1Q13616 776 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 PDK2Q15119 407 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 CCNG2Q16589 344 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 SMTNL2Q2TAL5 461 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 BOLA3Q53S33 107 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 KCNT1Q5JUK3 1230 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 RTP2Q5QGT7 225 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 PM20D1Q6GTS8 502 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 CCNI2Q6ZMN8 369 aaPredicted RBP9.8□□□□□ -0.84
VPS52-216ENST00000471309 BBS12Q6ZW61 710 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 CEP57Q86XR8 500 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 JAMLQ86YT9 394 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 PSTKQ8IV42 348 aaKnown RBP9.8□□□□□ -0.84
VPS52-216ENST00000471309 FAM71BQ8TC56 605 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 C2orf15Q8WU43 125 aaKnown RBP9.8□□□□□ -0.84
VPS52-216ENST00000471309 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.8□□□□□ -0.84
VPS52-216ENST00000471309 HSPH1Q92598 858 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 IGSF21Q96ID5 467 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 C8orf48Q96LL4 319 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 TTPALQ9BTX7 342 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 HEMGNQ9BXL5 484 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 FRMD8P1Q9BZ68 369 aaPredicted RBP9.8□□□□□ -0.84
VPS52-216ENST00000471309 DCLK3Q9C098 648 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 MCOLN1Q9GZU1 580 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 EPB41L5Q9HCM4 733 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.8□□□□□ -0.84
VPS52-216ENST00000471309 ZNF446Q9NWS9 450 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 ABI2Q9NYB9 513 aaPredicted RBP9.8□□□□□ -0.84
VPS52-216ENST00000471309 RRN3Q9NYV6 651 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 PCDHB5Q9Y5E4 795 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 USP3Q9Y6I4 520 aa9.8□□□□□ -0.84
VPS52-216ENST00000471309 ZSCAN5CA6NGD5 496 aaPredicted RBP9.79□□□□□ -0.84
VPS52-216ENST00000471309 NT5C1B-RDH14C9J2C7 533 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 TNFRSF10BO14763 440 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 CAPN9O14815 690 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 ZMYND10O75800 440 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 ECEL1O95672 775 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 FYNP06241 537 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 USP17L7P0C7H9 530 aa9.79□□□□□ -0.84
VPS52-216ENST00000471309 MYBL2P10244 700 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms