RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 COCHO43405 550 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 HRO43593 1189 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 GADD45BO75293 160 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-211ENST00000471260 BEST1O76090 585 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 CAVIN2O95810 425 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 ADH1CP00326 375 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 RETP07949 1114 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 DMWDQ09019 674 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 STIM1Q13586 685 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 CLEC20AQ6ZU45 233 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 FUCA2Q9BTY2 467 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 MMRN2Q9H8L6 949 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 FAM49BQ9NUQ9 324 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 C2orf42Q9NWW7 574 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 SMPD4Q9NXE4 827 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 GMIPQ9P107 970 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 CFAP97Q9P2B7 532 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 SCML2Q9UQR0 700 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 COQ4Q9Y3A0 265 aa14.26□□□□□ -0.13
HMGN1-211ENST00000471260 PRR5-ARHGAP8B1AHC4 643 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 PSMA7O14818 248 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 TLR5O60602 858 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 CYP17A1P05093 508 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 OPRD1P41143 372 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 ARHGAP8P85298 464 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 ORC1Q13415 861 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 PUM1Q14671 1186 aaKnown RBP eCLIP14.25□□□□□ -0.13
HMGN1-211ENST00000471260 DHCR24Q15392 516 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 PREPLQ4J6C6 727 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-211ENST00000471260 ANKRD40Q6AI12 368 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 PKN3Q6P5Z2 889 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 KLHDC10Q6PID8 442 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 FOXR2Q6PJQ5 311 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 PRR23BQ6ZRT6 265 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 ZNF276Q8N554 614 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 WHAMMQ8TF30 809 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 DHTKD1Q96HY7 919 aaPredicted RBP14.25□□□□□ -0.13
HMGN1-211ENST00000471260 ZFRQ96KR1 1074 aaKnown RBP14.25□□□□□ -0.13
HMGN1-211ENST00000471260 TWNKQ96RR1 684 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 NACA2Q9H009 215 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 METTL14Q9HCE5 456 aaKnown RBP14.25□□□□□ -0.13
HMGN1-211ENST00000471260 CYLDQ9NQC7 956 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 SH3BP1Q9Y3L3 701 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 MYH10P35580 1976 aa14.25□□□□□ -0.13
HMGN1-211ENST00000471260 A0A0A0MRY4 1105 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 HHLA1C9JL84 531 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 FOXD2O60548 495 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 CCDC192P0DO97 292 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 CD58P19256 250 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 ADORA2BP29275 332 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 ATP5C1P36542 298 aaKnown RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 PSEN1P49768 467 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 MRPS21P82921 87 aaKnown RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 LMNB2Q03252 620 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 GAD2Q05329 585 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 GOLGA8FQ08AF8 430 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 GOLGA8DPQ0D2H9 430 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 GAB4Q2WGN9 574 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 HSF5Q4G112 596 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 TCERG1LQ5VWI1 586 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 HEATR6Q6AI08 1181 aaKnown RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 RHBDF2Q6PJF5 856 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 TADA2BQ86TJ2 420 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 RPLP0P6Q8NHW5 317 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 GAB3Q8WWW8 586 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 EZH1Q92800 747 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 SEMA4DQ92854 862 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 EEF2KMTQ96G04 330 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 TMEM176AQ96HP8 235 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 LOXL4Q96JB6 756 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 HEXIM2Q96MH2 286 aaKnown RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 DUSP16Q9BY84 665 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 UBXN6Q9BZV1 441 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 CCSER2Q9H7U1 834 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.134e-17■■■■■ 149.1
HMGN1-211ENST00000471260 CISHQ9NSE2 258 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 ARMCX3Q9UH62 379 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-211ENST00000471260 EBF1Q9UH73 591 aa14.24□□□□□ -0.13
HMGN1-211ENST00000471260 ZNF292O60281 2723 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 ATG2BQ96BY7 2078 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 SPTBN4Q9H254 2564 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 K7EQS6 105 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 PMM2O15305 246 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 ADH5P11766 374 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 ACO1P21399 889 aaKnown RBP14.23□□□□□ -0.13
HMGN1-211ENST00000471260 TGM1P22735 817 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 KIF11P52732 1056 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 DMC1Q14565 340 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 DCAF17Q5H9S7 520 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-211ENST00000471260 PPP1R26Q5T8A7 1209 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-211ENST00000471260 NAIF1Q69YI7 327 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-211ENST00000471260 RBM43Q6ZSC3 357 aaKnown RBP14.23□□□□□ -0.13
HMGN1-211ENST00000471260 NUDT18Q6ZVK8 323 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 HTR3DQ70Z44 454 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 CEP68Q76N32 757 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 CCDC186Q7Z3E2 898 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 CACNA2D4Q7Z3S7 1137 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 USP33Q8TEY7 942 aa14.23□□□□□ -0.13
HMGN1-211ENST00000471260 RMDN1Q96DB5 314 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms