RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PTCHD4Q6ZW05 846 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 SFTPA1Q8IWL2 248 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 GALNT4Q8N4A0 578 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 SELENOOQ9BVL4 669 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 ZNF287Q9HBT7 754 aa6.02□□□□□ -1.45
PRPF40A-206ENST00000471167 LOC102724159A0A0B4J2E5 919 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 MT-ND5P03915 603 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 A1BGP04217 495 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 CERS1P27544 350 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 EPHA3P29320 983 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 PWP2Q15269 919 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 SEC23BQ15437 767 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 MANEALQ5VSG8 457 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 FMNL3Q8IVF7 1028 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 GALNT16Q8N428 558 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 SIRT6Q8N6T7 355 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 PNISRQ8TF01 805 aaKnown RBP6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 OGDHLQ9ULD0 1010 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 RIPOR2Q9Y4F9 1068 aa6.01□□□□□ -1.45
PRPF40A-206ENST00000471167 CYP2D7A0A087X1C5 515 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 EXOC5O00471 708 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 CES2O00748 559 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 FCHO1O14526 889 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 RGS10O43665 173 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 PIAS2O75928 621 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 TOP3BO95985 862 aaKnown RBP6□□□□□ -1.45
PRPF40A-206ENST00000471167 PRKAR1BP31321 381 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 HTR7P34969 479 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 GATMP50440 423 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 SLC29A2Q14542 456 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 ETFDHQ16134 617 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 C11orf44Q8N8P7 122 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 PRSS22Q9GZN4 317 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 SPRTNQ9H040 489 aaPredicted RBP6□□□□□ -1.45
PRPF40A-206ENST00000471167 KLHL13Q9P2N7 655 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 HDAC9Q9UKV0 1011 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 USP22Q9UPT9 525 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 PAXBP1Q9Y5B6 917 aa6□□□□□ -1.45
PRPF40A-206ENST00000471167 WDR17Q8IZU2 1322 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 CACNA1IQ9P0X4 2223 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 BCAR3O75815 825 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 MT-CO3P00414 261 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 ARHGAP25P42331 645 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 PIK3CBP42338 1070 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 PGDP52209 483 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 FAM187BQ17R55 369 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 KRT78Q8N1N4 520 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 SMG7Q92540 1137 aaKnown RBP5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 PHKBQ93100 1093 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 PRR11Q96HE9 360 aaPredicted RBP5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 SNX22Q96L94 193 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 GAR1Q9NY12 217 aaKnown RBP5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 ITGB1BP2Q9UKP3 347 aa5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 SCAF8Q9UPN6 1271 aaKnown RBP5.99□□□□□ -1.45
PRPF40A-206ENST00000471167 GOLGA6CA6NDK9 693 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 GOLGA6BA6NDN3 693 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 M0R3H8 397 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 PARNO95453 639 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 GOLGA6DP0CG33 693 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 SLC5A1P13866 664 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 CARSP49589 748 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 COPB1P53618 953 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 COPAP53621 1224 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 STK3Q13188 491 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 MORN5Q5VZ52 161 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 GRHL2Q6ISB3 625 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 WDR75Q8IWA0 830 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 RNF152Q8N8N0 203 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 ADAMTS18Q8TE60 1221 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 EDC3Q96F86 508 aaKnown RBP5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 BTBD1Q9H0C5 482 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 MYH16Q9H6N6 1097 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 GOLGA6AQ9NYA3 693 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 SLC27A6Q9Y2P4 619 aa5.98□□□□□ -1.45
PRPF40A-206ENST00000471167 H3BNC9 293 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 MGEA5O60502 916 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 MBPP02686 304 aaPredicted RBP5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 CHRM5P08912 532 aaPredicted RBP5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 CREB1P16220 341 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 TPH1P17752 444 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 ATF3P18847 181 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 IL1R2P27930 398 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 MTAPQ13126 283 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 MEX3CQ5U5Q3 659 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 DGKHQ86XP1 1220 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 EXOC8Q8IYI6 725 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 ZNF48Q96MX3 618 aaPredicted RBP5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 STRBPQ96SI9 672 aaKnown RBP5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 EFHD1Q9BUP0 239 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 TRIM36Q9NQ86 728 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 PRDM11Q9NQV5 511 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 GJB4Q9NTQ9 266 aa5.97□□□□□ -1.45
PRPF40A-206ENST00000471167 KCNU1A8MYU2 1149 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 PSMD9O00233 223 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 MOSPD3O75425 235 aa5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 ATP5F1P24539 256 aaPredicted RBP5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 SUMO2P61956 95 aaKnown RBP5.96□□□□□ -1.46
PRPF40A-206ENST00000471167 Q4G0T1 1027 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms