RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 YWHAGP61981 247 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCM2-204ENST00000470837 ATP11AP98196 1134 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 CLUL1Q15846 466 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 CDO1Q16878 200 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 SDHAF4Q5VUM1 108 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 PM20D1Q6GTS8 502 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 CC2D1AQ6P1N0 951 aaPredicted RBP10.22□□□□□ -0.77
CCM2-204ENST00000470837 GPRIN1Q7Z2K8 1008 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 TADA2BQ86TJ2 420 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 NT5DC3Q86UY8 548 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 MON1AQ86VX9 555 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 TCEAL8Q8IYN2 117 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 EMC1Q8N766 993 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 NIPA2Q8N8Q9 360 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 PDZD8Q8NEN9 1154 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 JOSD2Q8TAC2 188 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 SCAMP5Q8TAC9 235 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 GIPC2Q8TF65 315 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 CLEC4CQ8WTT0 213 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 PBKQ96KB5 322 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 KLHL5Q96PQ7 755 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 CDK5RAP1Q96SZ6 601 aaKnown RBP10.22□□□□□ -0.77
CCM2-204ENST00000470837 LMAN2LQ9H0V9 348 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 GOLPH3Q9H4A6 298 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 RRAGDQ9NQL2 400 aaPredicted RBP10.22□□□□□ -0.77
CCM2-204ENST00000470837 TLR8Q9NR97 1041 aaKnown RBP10.22□□□□□ -0.77
CCM2-204ENST00000470837 ABCC13Q9NSE7 274 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 UXTQ9UBK9 157 aaPredicted RBP10.22□□□□□ -0.77
CCM2-204ENST00000470837 TMEM59LQ9UK28 342 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 SNX12Q9UMY4 172 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 SCML2Q9UQR0 700 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 YBX2Q9Y2T7 364 aaKnown RBP10.22□□□□□ -0.77
CCM2-204ENST00000470837 YIPF1Q9Y548 306 aa10.22□□□□□ -0.77
CCM2-204ENST00000470837 MKI67P46013 3256 aaKnown RBP10.22□□□□□ -0.77
CCM2-204ENST00000470837 C2orf71A6NGG8 1288 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 C2CD4BA6NLJ0 364 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 SLC38A8A6NNN8 435 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 DPYSL4O14531 572 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 GRM6O15303 877 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 TGM5O43548 720 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 PSTPIP1O43586 416 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 NCK2O43639 380 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 LILRB3O75022 631 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 SOAT2O75908 522 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 F9P00740 461 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 PRLRP16471 622 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 PCK1P35558 622 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 GJC1P36383 396 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 FLT3P36888 993 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 PBX2P40425 430 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 PTPN9P43378 593 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 GPR15P49685 360 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 SULT1E1P49888 294 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 RWDD2BP57060 319 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 ERVFC1P60507 584 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 CKAP4Q07065 602 aaKnown RBP10.21□□□□□ -0.77
CCM2-204ENST00000470837 TWF1Q12792 350 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 SLC25A52Q3SY17 297 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 SEL1L2Q5TEA6 688 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 BSPRYQ5W0U4 402 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 PAPD7Q5XG87 772 aaKnown RBP10.21□□□□□ -0.77
CCM2-204ENST00000470837 SCYL2Q6P3W7 929 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 RTL10Q7L3V2 364 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 DEFB106AQ8N104 65 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 TTC9BQ8N6N2 239 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 STKLD1Q8NE28 680 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 MNS1Q8NEH6 495 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 GPR152Q8TDT2 470 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 FAM172AQ8WUF8 416 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 RNF34Q969K3 372 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 TIFAQ96CG3 184 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 ZNF512Q96ME7 567 aaPredicted RBP10.21□□□□□ -0.77
CCM2-204ENST00000470837 CFAP57Q96MR6 1250 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 GCNAQ96QF7 691 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 PSMB7Q99436 277 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 NAP1L3Q99457 506 aaPredicted RBP10.21□□□□□ -0.77
CCM2-204ENST00000470837 TRIM7Q9C029 511 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 NACA2Q9H009 215 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 FAM204AQ9H8W3 233 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 CERS4Q9HA82 394 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 TMEM30AQ9NV96 361 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 DDX56Q9NY93 547 aaKnown RBP10.21□□□□□ -0.77
CCM2-204ENST00000470837 RNF14Q9UBS8 474 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 PACSIN2Q9UNF0 486 aaPredicted RBP10.21□□□□□ -0.77
CCM2-204ENST00000470837 ASB3Q9Y575 518 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 INSL5Q9Y5Q6 135 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 USP3Q9Y6I4 520 aa10.21□□□□□ -0.77
CCM2-204ENST00000470837 YJEFN3A6XGL0 299 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 E7ENQ6 273 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 TNFRSF10BO14763 440 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 CEP104O60308 925 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 C1RP00736 705 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 CTNNA2P26232 953 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 CTNNA1P35221 906 aaKnown RBP10.2□□□□□ -0.78
CCM2-204ENST00000470837 RDXP35241 583 aaKnown RBP10.2□□□□□ -0.78
CCM2-204ENST00000470837 PPP3CCP48454 512 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 SMAD3P84022 425 aaKnown RBP10.2□□□□□ -0.78
CCM2-204ENST00000470837 DEUP1Q05D60 604 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 TAF10Q12962 218 aa10.2□□□□□ -0.78
CCM2-204ENST00000470837 TAF5Q15542 800 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms