RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SH3BP1Q9Y3L3 701 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 STYXL1Q9Y6J8 313 aa9.72□□□□□ -0.85
CCDC171-204ENST00000470191 LOC400499M0QZD8 3231 aa9.71□□□□□ -0.85
CCDC171-204ENST00000470191 A0A1W2PQF6 199 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 FAM149AA5PLN7 773 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 WASH3PC4AMC7 463 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 CLDN5O00501 218 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 TRIM66O15016 1216 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 GJB3O75712 270 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 GCNT3O95395 438 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 OAS1P00973 400 aaKnown RBP9.71□□□□□ -0.86
CCDC171-204ENST00000470191 ATXN1LP0C7T5 689 aaKnown RBP9.71□□□□□ -0.86
CCDC171-204ENST00000470191 GNSP15586 552 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 SCP2P22307 547 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 GRIN1Q05586 938 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 MYO1EQ12965 1108 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 SLC14A1Q13336 389 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 RILPL1Q5EBL4 403 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 GRAMD4Q6IC98 578 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 VSTM1Q6UX27 236 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 ZNF720Q7Z2F6 126 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 DDX42Q86XP3 938 aaKnown RBP eCLIP9.71□□□□□ -0.86
CCDC171-204ENST00000470191 TMEM25Q86YD3 366 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 BBS7Q8IWZ6 715 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 ZCCHC9Q8N567 271 aaKnown RBP9.71□□□□□ -0.86
CCDC171-204ENST00000470191 KCTD17Q8N5Z5 321 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 TERB1Q8NA31 727 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 ADAM32Q8TC27 787 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 IPO4Q8TEX9 1081 aaKnown RBP9.71□□□□□ -0.86
CCDC171-204ENST00000470191 LARP4BQ92615 738 aaKnown RBP9.71□□□□□ -0.86
CCDC171-204ENST00000470191 KCNN1Q92952 543 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 BHMTQ93088 406 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 FBXO32Q969P5 355 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 PCED1BQ96HM7 432 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 HPDLQ96IR7 371 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 ANKRD36BP1Q96IX9 119 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 SLITRK1Q96PX8 696 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 ACCSQ96QU6 501 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 TTLL2Q9BWV7 592 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 SNX25Q9H3E2 840 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 CCSER2Q9H7U1 834 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 SPHK2Q9NRA0 654 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 DNAJC17Q9NVM6 304 aaKnown RBP9.71□□□□□ -0.86
CCDC171-204ENST00000470191 CACNA2D2Q9NY47 1150 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 TBC1D14Q9P2M4 693 aa9.71□□□□□ -0.86
CCDC171-204ENST00000470191 CHORDC1Q9UHD1 332 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-204ENST00000470191 A0A0A0MRY4 1105 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 E2F8A0AVK6 867 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 NEDD8-MDP1E9PL57 170 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 COCHO43405 550 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 ZNF217O75362 1048 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 CLSTN1O94985 981 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 TNNC2P02585 160 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 PFKLP17858 780 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 ABCD1P33897 745 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 GSE1Q14687 1217 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 MAPRE1Q15691 268 aaKnown RBP9.7□□□□□ -0.86
CCDC171-204ENST00000470191 WDR45BQ5MNZ6 344 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 TPGS1Q6ZTW0 290 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 NUDT18Q6ZVK8 323 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 CACUL1Q86Y37 369 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 ETFBKMTQ8IXQ9 262 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 GLIS3Q8NEA6 775 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 OR5B17Q8NGF7 314 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 OR6B3Q8NGW1 331 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 CXorf38Q8TB03 319 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 PIP4K2CQ8TBX8 421 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 MYCBPAPQ8TBZ2 947 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 RHBDD1Q8TEB9 315 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 SCFD1Q8WVM8 642 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 ZSCAN31Q96LW9 406 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-204ENST00000470191 MRPL45Q9BRJ2 306 aaKnown RBP9.7□□□□□ -0.86
CCDC171-204ENST00000470191 CBWD1Q9BRT8 395 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 GPR174Q9BXC1 333 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 TRIM9Q9C026 710 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 ZNF518BQ9C0D4 1074 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 NACA2Q9H009 215 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 DPEP3Q9H4B8 488 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 FAM124BQ9H5Z6 455 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-204ENST00000470191 GAREM1Q9H706 876 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 TMEM30AQ9NV96 361 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 EHD2Q9NZN4 543 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 SUSD2Q9UGT4 822 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 PCOLCE2Q9UKZ9 415 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 PTPRJQ12913 1337 aa9.7□□□□□ -0.86
CCDC171-204ENST00000470191 MUC22E2RYF6 1773 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-204ENST00000470191 TRABD2BA6NFA1 517 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 H3BQV1 296 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 PRPF6O94906 941 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 OLFM2O95897 454 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 LDHAP00338 332 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 NCAM1P13591 858 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 IDEP14735 1019 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 PTPN1P18031 435 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 WARSP23381 471 aaKnown RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 YWHAQP27348 245 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 GNL1P36915 607 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-204ENST00000470191 PPP3CCP48454 512 aa9.69□□□□□ -0.86
CCDC171-204ENST00000470191 CASP5P51878 434 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms