RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 NTSR1P30989 418 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 PICALMQ13492 652 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 MANEALQ5VSG8 457 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 PRAMEF17Q5VTA0 474 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 CCSAPQ6IQ19 270 aaPredicted RBP4.7□□□□□ -1.66
BRCA2-202ENST00000470094 SERPINA13PQ6UXR4 307 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 NOL8Q76FK4 1167 aaKnown RBP4.7□□□□□ -1.66
BRCA2-202ENST00000470094 KRT28Q7Z3Y7 464 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 VGLL2Q8N8G2 317 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 RNF152Q8N8N0 203 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 CCDC150Q8NCX0 1101 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 SEMA6DQ8NFY4 1073 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 LRRC46Q96FV0 321 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 ZDHHC12Q96GR4 267 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 SNX18Q96RF0 628 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 NAA15Q9BXJ9 866 aaKnown RBP4.7□□□□□ -1.66
BRCA2-202ENST00000470094 MAGEB5Q9BZ81 275 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 SLC25A32Q9H2D1 315 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 STARD7Q9NQZ5 370 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 NKX1-2Q9UD57 310 aaPredicted RBP4.7□□□□□ -1.66
BRCA2-202ENST00000470094 STEAP1Q9UHE8 339 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 RIMKLBQ9ULI2 386 aa4.7□□□□□ -1.66
BRCA2-202ENST00000470094 A0A1W2PPC4 97 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 AGPSO00116 658 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 SPRY2O43597 315 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 TMPRSS11DO60235 418 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 MYL4P12829 197 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 RENBPP51606 427 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 PSG6Q00889 435 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 TFF2Q03403 129 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 GRM1Q13255 1194 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 ST3GAL2Q16842 350 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 LONRF1Q17RB8 773 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 PROSER3Q2NL68 480 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 RNASE12Q5GAN4 147 aaKnown RBP4.69□□□□□ -1.66
BRCA2-202ENST00000470094 CLEC9AQ6UXN8 241 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 CATSPERGQ6ZRH7 1159 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 USP49Q70CQ1 688 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 DPP9Q86TI2 863 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 C11orf44Q8N8P7 122 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 FAM227BQ96M60 508 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 MMS19Q96T76 1030 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 MYO1AQ9UBC5 1043 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 LPAR3Q9UBY5 353 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 VPS51Q9UID3 782 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 FRMD4BQ9Y2L6 1034 aa4.69□□□□□ -1.66
BRCA2-202ENST00000470094 A8MVJ9 347 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 UBE2Q2LH0YL09 131 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 IDEP14735 1019 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 ATICP31939 592 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 DIO1P49895 249 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 TUBA4AP68366 448 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 LMAN2Q12907 356 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 CLCA4Q14CN2 919 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 CERKLQ49MI3 558 aaPredicted RBP4.68□□□□□ -1.66
BRCA2-202ENST00000470094 KIAA1614Q5VZ46 1190 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 IL31Q6EBC2 164 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 USP17L6PQ6QN14 398 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 CRTC1Q6UUV9 634 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 FSTL5Q8N475 847 aaPredicted RBP4.68□□□□□ -1.66
BRCA2-202ENST00000470094 METTL25Q8N6Q8 603 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 PNLDC1Q8NA58 520 aaKnown RBP4.68□□□□□ -1.66
BRCA2-202ENST00000470094 MBD3L2Q8NHZ7 208 aaPredicted RBP4.68□□□□□ -1.66
BRCA2-202ENST00000470094 PARD3BQ8TEW8 1205 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 DPF1Q92782 380 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 CTHRC1Q96CG8 243 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 WDYHV1Q96HA8 205 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 VPS50Q96JG6 964 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 SELENOOQ9BVL4 669 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 ZBTB26Q9HCK0 441 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 MGAT4CQ9UBM8 478 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 SLC27A6Q9Y2P4 619 aa4.68□□□□□ -1.66
BRCA2-202ENST00000470094 A0A087WZ62 844 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 WIPF3A6NGB9 483 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 TISP43B9A030 160 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 RASA4BC9J798 803 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 POC1B-GALNT4F8VUJ3 575 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 RASA4O43374 803 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 PLIN1O60240 522 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 CCNT2O60583 730 aaKnown RBP4.67□□□□□ -1.66
BRCA2-202ENST00000470094 COQ9O75208 318 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 GCATO75600 419 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 USP1O94782 785 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 NHLRC4P0CG21 123 aaPredicted RBP4.67□□□□□ -1.66
BRCA2-202ENST00000470094 TNFSF4P23510 183 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 YY1P25490 414 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 TM4SF4P48230 202 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 ALDH5A1P51649 535 aaPredicted RBP4.67□□□□□ -1.66
BRCA2-202ENST00000470094 COPB1P53618 953 aaKnown RBP4.67□□□□□ -1.66
BRCA2-202ENST00000470094 COPAP53621 1224 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 AK2P54819 239 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 EIF4A1P60842 406 aaKnown RBP4.67□□□□□ -1.66
BRCA2-202ENST00000470094 KRTAP1-1Q07627 177 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 GPS1Q13098 491 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 ARL13BQ3SXY8 428 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 FAM209BQ5JX69 171 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 TMEM63BQ5T3F8 832 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 FAXCQ5TGI0 409 aa4.67□□□□□ -1.66
BRCA2-202ENST00000470094 ZNF782Q6ZMW2 699 aaPredicted RBP4.67□□□□□ -1.66
BRCA2-202ENST00000470094 BCDIN3DQ7Z5W3 292 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms