RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 E2F8A0AVK6 867 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 P4HA2O15460 535 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 CYP26A1O43174 497 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 EGFP01133 1207 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 PGFP49763 221 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 KIF11P52732 1056 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 LRMPQ12912 555 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 ARHGAP17Q68EM7 881 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 NAIF1Q69YI7 327 aaPredicted RBP19.28■□□□□ 0.68
PHGDH-204ENST00000469443 ADGRG2Q8IZP9 1017 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 NACA2Q9H009 215 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 TBC1D14Q9P2M4 693 aa19.28■□□□□ 0.68
PHGDH-204ENST00000469443 SCAMP3O14828 347 aaKnown RBP19.27■□□□□ 0.68
PHGDH-204ENST00000469443 CYP17A1P05093 508 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 MARSP56192 900 aaKnown RBP19.27■□□□□ 0.68
PHGDH-204ENST00000469443 CETN1Q12798 172 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 FBXO43Q4G163 708 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 TRIM59Q8IWR1 403 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 UBR7Q8N806 425 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 SUMF1Q8NBK3 374 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 NT5C1BQ96P26 610 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 SRRTQ9BXP5 876 aaKnown RBP19.27■□□□□ 0.68
PHGDH-204ENST00000469443 UBXN6Q9BZV1 441 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 CYLDQ9NQC7 956 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 C2orf42Q9NWW7 574 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 SH3BP1Q9Y3L3 701 aa19.27■□□□□ 0.68
PHGDH-204ENST00000469443 MYO18AQ92614 2054 aaKnown RBP19.27■□□□□ 0.68
PHGDH-204ENST00000469443 RALGAPA1Q6GYQ0 2036 aa19.27■□□□□ 0.67
PHGDH-204ENST00000469443 K7ESF4 209 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 ATG13O75143 517 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 RNF40O75150 1001 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 FGFR1OPO95684 399 aaKnown RBP19.26■□□□□ 0.67
PHGDH-204ENST00000469443 ATP5C1P36542 298 aaKnown RBP19.26■□□□□ 0.67
PHGDH-204ENST00000469443 PSEN1P49768 467 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 DHCR24Q15392 516 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 GAB4Q2WGN9 574 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 PKN3Q6P5Z2 889 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 CCDC186Q7Z3E2 898 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 ANKRD52Q8NB46 1076 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 LMO3Q8TAP4 145 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 OTUB2Q96DC9 234 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 NMUR1Q9HB89 426 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 OSER1Q9NX31 292 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 USP3Q9Y6I4 520 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 FRYLO94915 3013 aa19.26■□□□□ 0.67
PHGDH-204ENST00000469443 A0A1W2PQH9 124 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 CHURC1-FNTBB4DL54 471 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 TBX18O95935 607 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 OPRD1P41143 372 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 SLC8A3P57103 927 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 KCNH2Q12809 1159 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 SGO2Q562F6 1265 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 EZH1Q92800 747 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-204ENST00000469443 KLF16Q9BXK1 252 aaPredicted RBP19.25■□□□□ 0.67
PHGDH-204ENST00000469443 EPC1Q9H2F5 836 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.25■□□□□ 0.67
PHGDH-204ENST00000469443 RWDD2AQ9UIY3 292 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.25■□□□□ 0.67
PHGDH-204ENST00000469443 GPR179Q6PRD1 2367 aa19.25■□□□□ 0.67
PHGDH-204ENST00000469443 ADH1CP00326 375 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 CCDC192P0DO97 292 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 IRF1P10914 325 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 VDRP11473 427 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 RARGP13631 454 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 CD19P15391 556 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 HOXA6P31267 233 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 FNTBP49356 437 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 GOLGA7BQ2TAP0 167 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 KLHDC10Q6PID8 442 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 RHBDF2Q6PJF5 856 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 SCD5Q86SK9 330 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 PIGZQ86VD9 579 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 TTC30AQ86WT1 665 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 PPM1KQ8N3J5 372 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 ZNF276Q8N554 614 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 CLSTN2Q9H4D0 955 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 HESX1Q9UBX0 185 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 NAGPAQ9UK23 515 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 TSPAN16Q9UKR8 245 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 KIAA1257Q9ULG3 409 aa19.24■□□□□ 0.67
PHGDH-204ENST00000469443 SPTBN4Q9H254 2564 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 AFPP02771 609 aaKnown RBP19.23■□□□□ 0.67
PHGDH-204ENST00000469443 ADH5P11766 374 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 BCAT1P54687 386 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 GOLGA8FQ08AF8 430 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 DMWDQ09019 674 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 GOLGA8DPQ0D2H9 430 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 RAB41Q5JT25 222 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 TMEM270Q6UE05 265 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 CLEC17AQ6ZS10 378 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 LONP2Q86WA8 852 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 BBS7Q8IWZ6 715 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 EHBP1Q8NDI1 1231 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 CCDC26Q8TAB7 109 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 RUBCNQ92622 972 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 WBP2Q969T9 261 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 CLIC5Q9NZA1 410 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 SMG5Q9UPR3 1016 aaKnown RBP19.23■□□□□ 0.67
PHGDH-204ENST00000469443 PCDHB4Q9Y5E5 795 aa19.23■□□□□ 0.67
PHGDH-204ENST00000469443 XPO1O14980 1071 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms