RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 FUKQ8N0W3 1084 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 C12orf29Q8N999 325 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 DEFB124Q8NES8 71 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 CCDC26Q8TAB7 109 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 PARD3BQ8TEW8 1205 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 ZNF396Q96N95 335 aaPredicted RBP13.01□□□□□ -0.33
HDAC3-204ENST00000469207 ACOX2Q99424 681 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 SMOQ99835 787 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 CUEDC2Q9H467 287 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 POLMQ9NP87 494 aaPredicted RBP13.01□□□□□ -0.33
HDAC3-204ENST00000469207 IL37Q9NZH6 218 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 HMGXB4Q9UGU5 601 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 NUDT5Q9UKK9 219 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 PCDHA7Q9UN72 937 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 WASF3Q9UPY6 502 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 SH3BP1Q9Y3L3 701 aa13.01□□□□□ -0.33
HDAC3-204ENST00000469207 MYO18AQ92614 2054 aaKnown RBP13.01□□□□□ -0.33
HDAC3-204ENST00000469207 E2F8A0AVK6 867 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 K7ELQ4 463 aaPredicted RBP13□□□□□ -0.33
HDAC3-204ENST00000469207 TULP3O75386 442 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 AP1G2O75843 785 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 ALDH1A2O94788 518 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 RTN3O95197 1032 aaPredicted RBP13□□□□□ -0.33
HDAC3-204ENST00000469207 STAU1O95793 577 aaKnown RBP13□□□□□ -0.33
HDAC3-204ENST00000469207 ADH1CP00326 375 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
HDAC3-204ENST00000469207 ITPKAP23677 461 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 ATICP31939 592 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 EIF2DP41214 584 aaKnown RBP13□□□□□ -0.33
HDAC3-204ENST00000469207 TNFRSF4P43489 277 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 STK4Q13043 487 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 NCOA4Q13772 614 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 BMT2Q1RMZ1 405 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 ZNF699Q32M78 642 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 ZNF667Q5HYK9 610 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 EOGTQ5NDL2 527 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 SNX30Q5VWJ9 437 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 SPOPLQ6IQ16 392 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 LPCAT2Q7L5N7 544 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 ETFBKMTQ8IXQ9 262 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 SYAP1Q96A49 352 aaPredicted RBP13□□□□□ -0.33
HDAC3-204ENST00000469207 JAKMIP2Q96AA8 810 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 SPHK2Q9NRA0 654 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 OSER1Q9NX31 292 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 TBC1D14Q9P2M4 693 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 SERTAD1Q9UHV2 236 aa13□□□□□ -0.33
HDAC3-204ENST00000469207 MDM4O15151 490 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 KLRC4O43908 158 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 GREM1O60565 184 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 YEATS4O95619 227 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 PROS1P07225 676 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 ZDHHC11BP0C7U3 371 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 GABRG2P18507 467 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 NDST1P52848 882 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 MAP3K7CLP57077 242 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 C10orf76Q5T2E6 689 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 KIAA1211LQ6NV74 962 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 TPGS1Q6ZTW0 290 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 TOGARAM2Q6ZUX3 1019 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 GPRIN1Q7Z2K8 1008 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 C11orf74Q86VG3 221 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 DDX42Q86XP3 938 aaKnown RBP eCLIP12.99□□□□□ -0.33
HDAC3-204ENST00000469207 C12orf56Q8IXR9 622 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 ZNF513Q8N8E2 541 aaPredicted RBP12.99□□□□□ -0.33
HDAC3-204ENST00000469207 KIAA1958Q8N8K9 716 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 OR2I1PQ8NGU4 316 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 WHAMMQ8TF30 809 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 P2RY11Q96G91 374 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 SLC6A17Q9H1V8 727 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 VRTNQ9H8Y1 702 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 DMAP1Q9NPF5 467 aaPredicted RBP12.99□□□□□ -0.33
HDAC3-204ENST00000469207 CD93Q9NPY3 652 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 KRT82Q9NSB4 513 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 FAM49BQ9NUQ9 324 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 DEC1Q9P2X7 70 aa12.99□□□□□ -0.33
HDAC3-204ENST00000469207 ADAMTS9Q9P2N4 1935 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 PVALEFA0A1B0GWK0 134 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 FAM92AA1XBS5 289 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 WASH3PC4AMC7 463 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 PRRT4C9JH25 899 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 CEACAM1P13688 526 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 ENGP17813 658 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 ADORA2BP29275 332 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 SNRPFP62306 86 aaKnown RBP12.98□□□□□ -0.33
HDAC3-204ENST00000469207 CLDN10P78369 228 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 PKP1Q13835 747 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 C1orf220Q5T0J3 134 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 EGFLAMQ63HQ2 1017 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 UNQ6494/PRO21346Q6UXR6 183 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 SYT12Q8IV01 421 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 SPRYD3Q8NCJ5 442 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 KIAA0895Q8NCT3 520 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 OVCA2Q8WZ82 227 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 BHMTQ93088 406 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 SMARCD1Q96GM5 515 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 TWNKQ96RR1 684 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 SCNM1Q9BWG6 230 aa12.98□□□□□ -0.33
HDAC3-204ENST00000469207 KLF16Q9BXK1 252 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms