RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 KCNE5Q9UJ90 142 aa5.15□□□□□ -1.59
SCFD1-205ENST00000469043 LRRC3CA6NJW4 275 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 STARD3NLO95772 234 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 GCSHP23434 173 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 WASP42768 502 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 SUMO3P55854 103 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-205ENST00000469043 SNX16P57768 344 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 HSD11B2P80365 405 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 MALLQ13021 153 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 PTK2BQ14289 1009 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 DLGAP5Q15398 846 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 CYP2A13Q16696 494 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 AFMIDQ63HM1 303 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 MIGA2Q7L4E1 593 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 BHLHA9Q7RTU4 235 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 TTC7BQ86TV6 843 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 FANCBQ8NB91 859 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 CCDC191Q8NCU4 936 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 TDRD7Q8NHU6 1098 aaKnown RBP5.14□□□□□ -1.59
SCFD1-205ENST00000469043 SPPL3Q8TCT6 385 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 DPF2Q92785 391 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 FATE1Q969F0 183 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 SLC35A4Q96G79 324 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 MSLNLQ96KJ4 702 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 MYCBPQ99417 103 aaPredicted RBP5.14□□□□□ -1.59
SCFD1-205ENST00000469043 BRIP1Q9BX63 1249 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 KLK15Q9H2R5 256 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 GHITMQ9H3K2 345 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 PLSCR4Q9NRQ2 329 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 TM7SF3Q9NS93 570 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 KRT84Q9NSB2 600 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 HAUS2Q9NVX0 235 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 RNF7Q9UBF6 113 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 CPNE7Q9UBL6 633 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 ARHGAP26Q9UNA1 814 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 MAN2B2Q9Y2E5 1009 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 ATRNL1Q5VV63 1379 aa5.14□□□□□ -1.59
SCFD1-205ENST00000469043 A0A0B4J269 797 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 TRIM64A6NGJ6 449 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 DNAJC9-AS1A6NH13 148 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 LRRC14BA6NHZ5 514 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 TRIM64BA6NI03 449 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 MGST3O14880 152 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 ERN1O75460 977 aaKnown RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 C1QL1O75973 258 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 RTN3O95197 1032 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 RPLP2P05387 115 aaKnown RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 APOA4P06727 396 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 CKBP12277 381 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 ALOX12P18054 663 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 ACTN2P35609 894 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 PIK3CAP42336 1068 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 PAPOLAP51003 745 aaKnown RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 HK3P52790 923 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 CASP6P55212 293 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 NKX6-1P78426 367 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 SRSF4Q08170 494 aaKnown RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 NOGQ13253 232 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 TANGO2Q6ICL3 276 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 FBXO38Q6PIJ6 1188 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 Q6ZVL8 140 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 BEND5Q7L4P6 421 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 PQLC1Q8N2U9 271 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 FBXO18Q8NFZ0 1043 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 FAM71BQ8TC56 605 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 STT3BQ8TCJ2 826 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 ZUFSPQ96AP4 578 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 NACC2Q96BF6 587 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 SLF1Q9BQI6 1058 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 MRPL9Q9BYD2 267 aaKnown RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 LMBRD1Q9NUN5 540 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 KCTD5Q9NXV2 234 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 TBC1D29Q9UFV1 150 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 SRP68Q9UHB9 627 aaKnown RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 CPA4Q9UI42 421 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 VPS28Q9UK41 221 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 FEM1BQ9UK73 627 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 PCDHA13Q9Y5I0 950 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 AATKQ6ZMQ8 1374 aa5.13□□□□□ -1.59
SCFD1-205ENST00000469043 RSF1Q96T23 1441 aaPredicted RBP5.13□□□□□ -1.59
SCFD1-205ENST00000469043 PI4KAP2A4QPH2 592 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 PODXLO00592 558 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 PEX1O43933 1283 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 TNFRSF6BO95407 300 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 MTHFD1P11586 935 aaKnown RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 MYL4P12829 197 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 NPR1P16066 1061 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 POLD2P49005 469 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 MMP14P50281 582 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 VAV2P52735 878 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 VAMP2P63027 116 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 HTRA4P83105 476 aaPredicted RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 PPP2R5CQ13362 524 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 EFR3AQ14156 821 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 ERV3-1Q14264 604 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 PLS1Q14651 629 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 SMAD1Q15797 465 aaKnown RBP5.12□□□□□ -1.59
SCFD1-205ENST00000469043 C3orf38Q5JPI3 329 aa5.12□□□□□ -1.59
SCFD1-205ENST00000469043 SULT6B1Q6IMI4 303 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms