RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 CD48P09326 243 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 KDELR1P24390 212 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 CDKN2BP42772 138 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 ARPP19P56211 112 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 COPS2P61201 443 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 NFE2Q16621 373 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 CYP1B1Q16678 543 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 TFDP3Q5H9I0 405 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 RSPO2Q6UXX9 243 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 CENPIQ92674 756 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 TBCBQ99426 244 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 TTPALQ9BTX7 342 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 RC3H2Q9HBD1 1191 aaKnown RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 POPDC2Q9HBU9 364 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 EPB41L5Q9HCM4 733 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 CALCOCO1Q9P1Z2 691 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 R3HDM2Q9Y2K5 976 aaKnown RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 EFCAB14O75071 495 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 SEC31AO94979 1220 aaKnown RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 MYBL2P10244 700 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 CHRNA3P32297 505 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 SYPL2Q5VXT5 272 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 CCDC137Q6PK04 289 aaKnown RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 MAATS1Q7Z4T9 603 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 GSPT2Q8IYD1 628 aaKnown RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 KCTD6Q8NC69 237 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 CMASQ8NFW8 434 aaPredicted RBP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 SCAMP5Q8TAC9 235 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 MAIP1Q8WWC4 291 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 ATG4AQ8WYN0 398 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 PNPLA8Q9NP80 782 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 IL23AQ9NPF7 189 aa21.51■■□□□ 1.03
TMEM53-207ENST00000468117 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.51■■□□□ 1.03
TMEM53-207ENST00000468117 hCG_1818297A0A087WSY0 165 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 OR6C75A6NL08 312 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 FYNP06241 537 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 MCM3P25205 808 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 PITX1P78337 314 aaPredicted RBP21.5■■□□□ 1.03
TMEM53-207ENST00000468117 DR1Q01658 176 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 SLC25A52Q3SY17 297 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 KCNT2Q6UVM3 1135 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 PRSS55Q6UWB4 352 aaPredicted RBP21.5■■□□□ 1.03
TMEM53-207ENST00000468117 C16orf59Q7L2K0 433 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 BHLHA9Q7RTU4 235 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 SCN4BQ8IWT1 228 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 IGSF21Q96ID5 467 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 SLC2A13Q96QE2 648 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 FAM118BQ9BPY3 351 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 VN1R3Q9BXE9 311 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 CHST7Q9NS84 486 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 NAALADL1Q9UQQ1 740 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 ZNF638Q14966 1978 aaKnown RBP21.5■■□□□ 1.03
TMEM53-207ENST00000468117 KIAA1671Q9BY89 1806 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 CPB1P15086 417 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 NOS2P35228 1153 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 KCNJ1P48048 391 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 SULT1E1P49888 294 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 IFRD2Q12894 506 aaPredicted RBP21.5■■□□□ 1.03
TMEM53-207ENST00000468117 SNX1Q13596 522 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 BTG3Q14201 252 aaPredicted RBP21.5■■□□□ 1.03
TMEM53-207ENST00000468117 TRADDQ15628 312 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 TMCO3Q6UWJ1 677 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 CCNI2Q6ZMN8 369 aaPredicted RBP21.5■■□□□ 1.03
TMEM53-207ENST00000468117 C12orf50Q8NA57 414 aaPredicted RBP21.5■■□□□ 1.03
TMEM53-207ENST00000468117 ATAD1Q8NBU5 361 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 FUBP3Q96I24 572 aaKnown RBP eCLIP21.5■■□□□ 1.03
TMEM53-207ENST00000468117 ZNF446Q9NWS9 450 aa21.5■■□□□ 1.03
TMEM53-207ENST00000468117 TBC1D4O60343 1298 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 EFEMP2O95967 443 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 PTPN7P35236 360 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 COILP38432 576 aaPredicted RBP21.49■■□□□ 1.03
TMEM53-207ENST00000468117 PM20D1Q6GTS8 502 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 ANKS3Q6ZW76 656 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 RUBCNQ92622 972 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 CALN1Q9BXU9 219 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 LRRC19Q9H756 370 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 ARFGAP3Q9NP61 516 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 GDF3Q9NR23 364 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.49■■□□□ 1.03
TMEM53-207ENST00000468117 GPATCH2LQ9NWQ4 482 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 PCYOX1Q9UHG3 505 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 PCDHB5Q9Y5E4 795 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 USP3Q9Y6I4 520 aa21.49■■□□□ 1.03
TMEM53-207ENST00000468117 CAPN9O14815 690 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 ERLIN1O75477 346 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 BAIAP3O94812 1187 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 TJP3O95049 919 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 LTFP02788 710 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 SLC5A3P53794 718 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 BOLA3Q53S33 107 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 ZC3H12AQ5D1E8 599 aaKnown RBP21.48■■□□□ 1.03
TMEM53-207ENST00000468117 SDHAF4Q5VUM1 108 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 OTUD1Q5VV17 481 aaPredicted RBP21.48■■□□□ 1.03
TMEM53-207ENST00000468117 STRADAQ7RTN6 431 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 IFT20Q8IY31 132 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 CCDC105Q8IYK2 499 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 TTC9BQ8N6N2 239 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 STKLD1Q8NE28 680 aa21.48■■□□□ 1.03
TMEM53-207ENST00000468117 HNRNPLLQ8WVV9 542 aaKnown RBP21.48■■□□□ 1.03
TMEM53-207ENST00000468117 NT5C3BQ969T7 300 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms