RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 PIK3CAP42336 1068 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 SGSM1Q2NKQ1 1148 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 EMC10Q5UCC4 262 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 PMS2CLQ68D20 193 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 IL17RCQ8NAC3 791 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 ZMIZ2Q8NF64 920 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 SLC2A14Q8TDB8 520 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 SMOQ99835 787 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 EDEM2Q9BV94 578 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 NACA2Q9H009 215 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 IL37Q9NZH6 218 aa22.31■■□□□ 1.16
COL9A3-207ENST00000467819 CIZ1Q9ULV3 898 aaPredicted RBP22.31■■□□□ 1.16
COL9A3-207ENST00000467819 GON4LQ3T8J9 2241 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.3■■□□□ 1.16
COL9A3-207ENST00000467819 SGK1O00141 431 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 BEST1O76090 585 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 ALDH1A2O94788 518 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 MAP3K7CLP57077 242 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 GAD2Q05329 585 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 SNX30Q5VWJ9 437 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 SV2AQ7L0J3 742 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 C11orf74Q86VG3 221 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 BBS7Q8IWZ6 715 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 NAT16Q8N8M0 369 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 C12orf29Q8N999 325 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 TMC2Q8TDI7 906 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 WBP2Q969T9 261 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 OTUB2Q96DC9 234 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 FRMD4BQ9Y2L6 1034 aa22.3■■□□□ 1.16
COL9A3-207ENST00000467819 HLA-DRAP01903 254 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 RPN1P04843 607 aaKnown RBP22.29■■□□□ 1.16
COL9A3-207ENST00000467819 ZDHHC11BP0C7U3 371 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 CHRM1P11229 460 aaPredicted RBP22.29■■□□□ 1.16
COL9A3-207ENST00000467819 ADORA2BP29275 332 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 GRIA2P42262 883 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 PI4KAP42356 2102 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 PGFP49763 221 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 TUBP50607 506 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 BTBD8Q5XKL5 378 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 TMEM174Q8WUU8 243 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 TAF4BQ92750 862 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 JAKMIP2Q96AA8 810 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 CHAMP1Q96JM3 812 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 COMMD8Q9NX08 183 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 BCCIPQ9P287 314 aaKnown RBP eCLIP22.29■■□□□ 1.16
COL9A3-207ENST00000467819 USP25Q9UHP3 1055 aa22.29■■□□□ 1.16
COL9A3-207ENST00000467819 FAM92AA1XBS5 289 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 CALUO43852 315 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-207ENST00000467819 TLR5O60602 858 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 ASS1P00966 412 aaKnown RBP22.28■■□□□ 1.16
COL9A3-207ENST00000467819 CMA1P23946 247 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 KIR2DL1P43626 348 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-207ENST00000467819 ASPAP45381 313 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 DHPSP49366 369 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-207ENST00000467819 ANO4Q32M45 955 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 EOGTQ5NDL2 527 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 C1orf220Q5T0J3 134 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 N4BP2L1Q5TBK1 243 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-207ENST00000467819 CYP2U1Q7Z449 544 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 UNC93AQ86WB7 457 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 CRYBG2Q8N1P7 616 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 PHTF2Q8N3S3 785 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 RLN3Q8WXF3 142 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 SPATA32Q96LK8 384 aa22.28■■□□□ 1.16
COL9A3-207ENST00000467819 POLMQ9NP87 494 aaPredicted RBP22.28■■□□□ 1.16
COL9A3-207ENST00000467819 TBC1D3BA6NDS4 549 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 PRR29P0C7W0 189 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 FAM200BP0CF97 657 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 TNFRSF4P43489 277 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 HSF5Q4G112 596 aaPredicted RBP22.27■■□□□ 1.16
COL9A3-207ENST00000467819 GPRIN1Q7Z2K8 1008 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 TMEM25Q86YD3 366 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 ETFBKMTQ8IXQ9 262 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 OLIG1Q8TAK6 271 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 HMGB4Q8WW32 186 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 LSM14BQ9BX40 385 aaKnown RBP22.27■■□□□ 1.16
COL9A3-207ENST00000467819 FBXO44Q9H4M3 255 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 CSNK1G1Q9HCP0 422 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 TLR8Q9NR97 1041 aaKnown RBP22.27■■□□□ 1.16
COL9A3-207ENST00000467819 SPHK2Q9NRA0 654 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 HPSEQ9Y251 543 aa22.27■■□□□ 1.16
COL9A3-207ENST00000467819 CEP295Q9C0D2 2601 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 A0A0A0MRY4 1105 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 LNP1A1A4G5 178 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 C4orf47A7E2U8 309 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 IKBKBO14920 756 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 HOXC11O43248 304 aaPredicted RBP22.26■■□□□ 1.15
COL9A3-207ENST00000467819 ADAM23O75077 832 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 TULP3O75386 442 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 TBX18O95935 607 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 MYL1P05976 194 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 TRIM49P0CI25 452 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 TRIM49CP0CI26 452 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 SYKP43405 635 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 VAMP7P51809 220 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 PGBD3Q8N328 593 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 WHAMMQ8TF30 809 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 SPACA7Q96KW9 195 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 TWNKQ96RR1 684 aa22.26■■□□□ 1.15
COL9A3-207ENST00000467819 IMPG2Q9BZV3 1241 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms