RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ZXDBP98169 803 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 TCERG1LQ5VWI1 586 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 TADA2BQ86TJ2 420 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 CYFIP2Q96F07 1278 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 TPSD1Q9BZJ3 242 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 POLMQ9NP87 494 aaPredicted RBP18.52■□□□□ 0.56
COL7A1-206ENST00000466591 ZDHHC9Q9Y397 364 aa18.52■□□□□ 0.56
COL7A1-206ENST00000466591 GPR179Q6PRD1 2367 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 TBC1D3BA6NDS4 549 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 EPN2O95208 641 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 KAT7O95251 611 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 SMC2O95347 1197 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 ACO1P21399 889 aaKnown RBP18.51■□□□□ 0.55
COL7A1-206ENST00000466591 TGM1P22735 817 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 ATP5C1P36542 298 aaKnown RBP18.51■□□□□ 0.55
COL7A1-206ENST00000466591 EIF2DP41214 584 aaKnown RBP18.51■□□□□ 0.55
COL7A1-206ENST00000466591 MRPS21P82921 87 aaKnown RBP18.51■□□□□ 0.55
COL7A1-206ENST00000466591 CREB5Q02930 508 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 DCAF17Q5H9S7 520 aaPredicted RBP18.51■□□□□ 0.55
COL7A1-206ENST00000466591 EOGTQ5NDL2 527 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 LY6G5CQ5SRR4 150 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 KRT39Q6A163 491 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 CRYBG2Q8N1P7 616 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 NAT16Q8N8M0 369 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 TAS1R2Q8TE23 839 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 USP33Q8TEY7 942 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 SPACA7Q96KW9 195 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 HEXIM2Q96MH2 286 aaKnown RBP18.51■□□□□ 0.55
COL7A1-206ENST00000466591 SMOQ99835 787 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 TMEM8AQ9HCN3 771 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 INVSQ9Y283 1065 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 PCDHGA5Q9Y5G8 931 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 ZNF292O60281 2723 aa18.51■□□□□ 0.55
COL7A1-206ENST00000466591 FAM237AA0A1B0GTK4 181 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 MAP3K13O43283 966 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 KLF8O95600 359 aaPredicted RBP18.5■□□□□ 0.55
COL7A1-206ENST00000466591 MPLP40238 635 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 GRIA2P42262 883 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 SLC6A11P48066 632 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 MXI1P50539 228 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 SF3A2Q15428 464 aaKnown RBP18.5■□□□□ 0.55
COL7A1-206ENST00000466591 NFIL3Q16649 462 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 ZNF394Q53GI3 561 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 RHBDF2Q6PJF5 856 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 PAQR9Q6ZVX9 377 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 TTC39CQ8N584 583 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 ALLCQ8N6M5 410 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 TXNDC5Q8NBS9 432 aaKnown RBP18.5■□□□□ 0.55
COL7A1-206ENST00000466591 DDX1Q92499 740 aaKnown RBP18.5■□□□□ 0.55
COL7A1-206ENST00000466591 GOLPH3LQ9H4A5 285 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 DEC1Q9P2X7 70 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 EBF1Q9UH73 591 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 NAGPAQ9UK23 515 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 MMP17Q9ULZ9 603 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 PCDHA5Q9Y5H7 936 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 ATG2BQ96BY7 2078 aa18.5■□□□□ 0.55
COL7A1-206ENST00000466591 K7EQS6 105 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 TNFRSF10BO14763 440 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 SLC30A4O14863 429 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 DCLK1O15075 740 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 BEST1O76090 585 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 RALAP11233 206 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 GTF2H1P32780 548 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 PPP3CAQ08209 521 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 PNOCQ13519 176 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 EDRF1Q3B7T1 1238 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 C10orf120Q5SQS8 335 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 SNX30Q5VWJ9 437 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 SDE2Q6IQ49 451 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 TRMT11Q7Z4G4 463 aaKnown RBP18.49■□□□□ 0.55
COL7A1-206ENST00000466591 BBS7Q8IWZ6 715 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 SMYD4Q8IYR2 804 aaPredicted RBP18.49■□□□□ 0.55
COL7A1-206ENST00000466591 EZH1Q92800 747 aaPredicted RBP18.49■□□□□ 0.55
COL7A1-206ENST00000466591 EEF2KMTQ96G04 330 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 XPO6Q96QU8 1125 aaKnown RBP18.49■□□□□ 0.55
COL7A1-206ENST00000466591 HNRNPABQ99729 332 aaKnown RBP18.49■□□□□ 0.55
COL7A1-206ENST00000466591 VPS45Q9NRW7 570 aa18.49■□□□□ 0.55
COL7A1-206ENST00000466591 MYH10P35580 1976 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 CYP26A1O43174 497 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 GDF9O60383 454 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 ZNF806P0C7X5 589 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 ENPEPQ07075 957 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 INCA1Q0VD86 236 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 STIM1Q13586 685 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 CRY1Q16526 586 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 PLK5Q496M5 336 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 HSF5Q4G112 596 aaPredicted RBP18.48■□□□□ 0.55
COL7A1-206ENST00000466591 PPM1JQ5JR12 505 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 CLEC20AQ6ZU45 233 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 FBXL13Q8NEE6 735 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 WHAMMQ8TF30 809 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 SMARCE1Q969G3 411 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 CSNK1G1Q9HCP0 422 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 SPHK2Q9NRA0 654 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 SCML2Q9UQR0 700 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 RALGAPA1Q6GYQ0 2036 aa18.48■□□□□ 0.55
COL7A1-206ENST00000466591 NEDD8-MDP1E9PL57 170 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 RARGP13631 454 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 TNFRSF4P43489 277 aa18.47■□□□□ 0.55
COL7A1-206ENST00000466591 PSEN1P49768 467 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms