RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 SIX4Q9UIU6 781 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 CDH9Q9ULB4 789 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 KIAA1257Q9ULG3 409 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 ASB3Q9Y575 518 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 ZFP37Q9Y6Q3 630 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 COL4A2P08572 1712 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 SPTAN1Q13813 2472 aaKnown RBP7.37□□□□□ -1.23
CLDN4-204ENST00000466411 DOPEY1Q5JWR5 2465 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 NUP205Q92621 2012 aa7.37□□□□□ -1.23
CLDN4-204ENST00000466411 PTPRJQ12913 1337 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 LRRC10BA6NIK2 292 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 J3QKU1 62 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 CDX4O14627 284 aaPredicted RBP7.36□□□□□ -1.23
CLDN4-204ENST00000466411 GABRDO14764 452 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 TEX28O15482 410 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 CBFA2T2O43439 604 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 CCDC172P0C7W6 258 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 ATF2P15336 505 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 BRCC3P46736 316 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 CCR3P51677 355 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 MFAP3P55082 362 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 MYL6P60660 151 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 DLG4P78352 724 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 KCNC4Q03721 635 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 PPP3CAQ08209 521 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 INCA1Q0VD86 236 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 SCAPQ12770 1279 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 VEPH1Q14D04 833 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 MEA1Q16626 185 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 CFAP221Q4G0U5 840 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 RTP2Q5QGT7 225 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 LMBRD2Q68DH5 695 aaPredicted RBP7.36□□□□□ -1.23
CLDN4-204ENST00000466411 KIAA1211LQ6NV74 962 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 VSTM1Q6UX27 236 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 ZNF852Q6ZMS4 543 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 ZNF605Q86T29 641 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 ITIH5Q86UX2 942 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 CREBRFQ8IUR6 639 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 HOMEZQ8IX15 550 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 TCEAL8Q8IYN2 117 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 PDCL2Q8N4E4 241 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 AOPEPQ8N6M6 819 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 TAS1R2Q8TE23 839 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 SMG7Q92540 1137 aaKnown RBP7.36□□□□□ -1.23
CLDN4-204ENST00000466411 CRELD1Q96HD1 420 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 FUCA2Q9BTY2 467 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 ELOVL4Q9GZR5 314 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
CLDN4-204ENST00000466411 XYLT2Q9H1B5 865 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 ALG2Q9H553 416 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 MAN1C1Q9NR34 630 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 C2orf42Q9NWW7 574 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 DDX43Q9NXZ2 648 aaKnown RBP7.36□□□□□ -1.23
CLDN4-204ENST00000466411 APEX2Q9UBZ4 518 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 LIMA1Q9UHB6 759 aaKnown RBP7.36□□□□□ -1.23
CLDN4-204ENST00000466411 AFF4Q9UHB7 1163 aaKnown RBP7.36□□□□□ -1.23
CLDN4-204ENST00000466411 FBXL5Q9UKA1 691 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 CDY1Q9Y6F8 540 aa7.36□□□□□ -1.23
CLDN4-204ENST00000466411 LGALS16A8MUM7 142 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 A8MXQ7 604 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 C2CD2LO14523 706 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 PRRG1O14668 218 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 ABLIM3O94929 683 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 VNN1O95497 513 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 SERPINC1P01008 464 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 LRG1P02750 347 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 CHRNB1P11230 501 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 ZNF18P17022 549 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 OR1D2P34982 312 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 GNL1P36915 607 aaPredicted RBP7.35□□□□□ -1.23
CLDN4-204ENST00000466411 MAGEA11P43364 429 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 ALDH1A3P47895 512 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 CXCL12P48061 93 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 SNX16P57768 344 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 BPIFB4P59827 614 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 RPL10AP62906 217 aaKnown RBP7.35□□□□□ -1.23
CLDN4-204ENST00000466411 PFKPQ01813 784 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 CUL2Q13617 745 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 SOWAHAQ2M3V2 549 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 CBWD6Q4V339 395 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 INTS6LQ5JSJ4 861 aaKnown RBP7.35□□□□□ -1.23
CLDN4-204ENST00000466411 CBWD3Q5JTY5 395 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 CBWD5Q5RIA9 395 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 C1orf220Q5T0J3 134 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 TRIM65Q6PJ69 517 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 C11orf57Q6ZUT1 292 aaPredicted RBP7.35□□□□□ -1.23
CLDN4-204ENST00000466411 IRF2BP1Q8IU81 584 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 TMEFF1Q8IYR6 380 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 ABCA7Q8IZY2 2146 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 EHBP1Q8NDI1 1231 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 MYCBPAPQ8TBZ2 947 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 PLEKHO2Q8TD55 490 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 EEF2KMTQ96G04 330 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 NT5C1AQ9BXI3 368 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 ZCWPW1Q9H0M4 648 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 NUCKS1Q9H1E3 243 aaKnown RBP7.35□□□□□ -1.23
CLDN4-204ENST00000466411 CXCL16Q9H2A7 254 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 MMRN2Q9H8L6 949 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 PLCB1Q9NQ66 1216 aa7.35□□□□□ -1.23
CLDN4-204ENST00000466411 HEBP1Q9NRV9 189 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms