RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 SLC26A7Q8TE54 656 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 DHX33Q9H6R0 707 aaKnown RBP20.5■□□□□ 0.87
SDF4-205ENST00000465727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.5■□□□□ 0.87
SDF4-205ENST00000465727 AGO2Q9UKV8 859 aaKnown RBP20.5■□□□□ 0.87
SDF4-205ENST00000465727 CCPG1Q9ULG6 757 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 WDR81Q562E7 1941 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 PTPRJQ12913 1337 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 UBR3Q6ZT12 1888 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 A6NJR5 290 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 KITP10721 976 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 IMPDH2P12268 514 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 PSMA2P25787 234 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 CRHR1P34998 444 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 STX3Q13277 289 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 MTM1Q13496 603 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 UBAP2LQ14157 1087 aaKnown RBP20.5■□□□□ 0.87
SDF4-205ENST00000465727 UGT2A3Q6UWM9 527 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 TAS1R3Q7RTX0 852 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 TRMT1LQ7Z2T5 733 aaKnown RBP20.5■□□□□ 0.87
SDF4-205ENST00000465727 CTAGE3PQ8IX95 158 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 KLHL23Q8NBE8 558 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 MIPOL1Q8TD10 442 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 CEP170P1Q96L14 293 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 CGRRF1Q99675 332 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 IMPG2Q9BZV3 1241 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 MAP3K20Q9NYL2 800 aaKnown RBP20.5■□□□□ 0.87
SDF4-205ENST00000465727 ADAMTS6Q9UKP5 1117 aa20.5■□□□□ 0.87
SDF4-205ENST00000465727 SPDYE2BA6NHP3 402 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 DKC1O60832 514 aaKnown RBP eCLIP20.49■□□□□ 0.872e-6■■■■□ 26.5
SDF4-205ENST00000465727 LRCH4O75427 683 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 DGAT1O75907 488 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 LDHAP00338 332 aaKnown RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 C6orf222P0C671 652 aaPredicted RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 SPDYE6P0CI01 402 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 RBP3P10745 1247 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 MYL4P12829 197 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 ERFP50548 548 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 NLRP11P59045 1033 aaKnown RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 MYBPC3Q14896 1274 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 SPDYE2Q495Y8 402 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 CES4AQ5XG92 561 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 RNF111Q6ZNA4 994 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 SATL1Q86VE3 508 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 CCDC33Q8N5R6 958 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 ICA1LQ8NDH6 482 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 IRGQQ8WZA9 623 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 GALNT8Q9NY28 637 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 RBAKQ9NYW8 714 aaPredicted RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 MARCOQ9UEW3 520 aaPredicted RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 MAD1L1Q9Y6D9 718 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 CCNE2O96020 404 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 ITGA2BP08514 1039 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 RPL5P46777 297 aaKnown RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 WNT7BP56706 349 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 DLG1Q12959 904 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 CCNIQ14094 377 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.49■□□□□ 0.87
SDF4-205ENST00000465727 LPCAT4Q643R3 524 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 FAM43BQ6ZT52 329 aaPredicted RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 TAB3Q8N5C8 712 aaPredicted RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 KCNN1Q92952 543 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 XAB2Q9HCS7 855 aaKnown RBP20.49■□□□□ 0.87
SDF4-205ENST00000465727 PCDHGC3Q9UN70 934 aa20.49■□□□□ 0.87
SDF4-205ENST00000465727 CCDC195A0A1B0GUA6 201 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 PEX2P28328 305 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 POLR2BP30876 1174 aaKnown RBP20.48■□□□□ 0.87
SDF4-205ENST00000465727 SLC25A3Q00325 362 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 ROR1Q01973 937 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 SMTNL2Q2TAL5 461 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 RABGAP1LQ5R372 815 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 STXBP5Q5T5C0 1151 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 SLFN12LQ6IEE8 588 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 RFX6Q8HWS3 928 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 RBM12BQ8IXT5 1001 aaKnown RBP20.48■□□□□ 0.87
SDF4-205ENST00000465727 MARVELD2Q8N4S9 558 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 PIWIL2Q8TC59 973 aaKnown RBP20.48■□□□□ 0.87
SDF4-205ENST00000465727 MPP4Q96JB8 637 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 PRICKLE1Q96MT3 831 aaPredicted RBP20.48■□□□□ 0.87
SDF4-205ENST00000465727 PREBQ9HCU5 417 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 PLK2Q9NYY3 685 aa20.48■□□□□ 0.87
SDF4-205ENST00000465727 APOBEC2Q9Y235 224 aaKnown RBP20.48■□□□□ 0.87
SDF4-205ENST00000465727 A0A0B4J269 797 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 TTLL13PA6NNM8 815 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 MEI4A8MW99 385 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 STRNO43815 780 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 CCDC166P0CW27 439 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 TUBB3Q13509 450 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 NCOA4Q13772 614 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 LRRC36Q1X8D7 754 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 DACT2Q5SW24 774 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 B3GNT6Q6ZMB0 384 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 LRRC39Q96DD0 335 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 CFAP36Q96G28 342 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 EBF4Q9BQW3 602 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 SLC13A1Q9BZW2 595 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 Q9H521 79 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 SUDS3Q9H7L9 328 aaPredicted RBP20.47■□□□□ 0.87
SDF4-205ENST00000465727 PDLIM7Q9NR12 457 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 ETNK2Q9NVF9 386 aa20.47■□□□□ 0.87
SDF4-205ENST00000465727 ZC3H7BQ9UGR2 993 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms