RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PLCG1P19174 1290 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 PDE6CP51160 858 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 CACNA2D1P54289 1103 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 CXADRP78310 365 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 TFAMQ00059 246 aaKnown RBP15.96■□□□□ 0.15
HDAC6-214ENST00000465269 TAF10Q12962 218 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 KIF19Q2TAC6 998 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 BTBD8Q5XKL5 378 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 DENND5BQ6ZUT9 1274 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 GPR155Q7Z3F1 870 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 FMNL3Q8IVF7 1028 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 ADGRF2Q8IZF7 708 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 C1orf127Q8N9H9 656 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 SYT2Q8N9I0 419 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-214ENST00000465269 FAM181AQ8N9Y4 354 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 ZNF560Q96MR9 790 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 REEP2Q9BRK0 252 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 CRTAC1Q9NQ79 661 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 TMEM30AQ9NV96 361 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 DNAJC17Q9NVM6 304 aaKnown RBP15.96■□□□□ 0.15
HDAC6-214ENST00000465269 WSB2Q9NYS7 404 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-214ENST00000465269 PCDHB6Q9Y5E3 794 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 SNX11Q9Y5W9 270 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 SNX9Q9Y5X1 595 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 AK5Q9Y6K8 562 aa15.96■□□□□ 0.15
HDAC6-214ENST00000465269 COL5A1P20908 1838 aaPredicted RBP15.96■□□□□ 0.14
HDAC6-214ENST00000465269 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-214ENST00000465269 HOXC11O43248 304 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-214ENST00000465269 TNFSF14O43557 240 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 MAGEA11P43364 429 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 CYP27A1Q02318 531 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 CCDC173Q0VFZ6 552 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 ORC2Q13416 577 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-214ENST00000465269 DHX8Q14562 1220 aaKnown RBP15.95■□□□□ 0.14
HDAC6-214ENST00000465269 FAM171BQ6P995 826 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 MYCT1Q8N699 235 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 LSM14AQ8ND56 463 aaKnown RBP15.95■□□□□ 0.14
HDAC6-214ENST00000465269 C1orf216Q8TAB5 229 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 NXPE2Q96DL1 559 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 SPATA17Q96L03 361 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 KIF2CQ99661 725 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 GABRG3Q99928 467 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 SYT15Q9BQS2 421 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 TTLL2Q9BWV7 592 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 SPHK2Q9NRA0 654 aa15.95■□□□□ 0.14
HDAC6-214ENST00000465269 LARSQ9P2J5 1176 aaKnown RBP15.95■□□□□ 0.14
HDAC6-214ENST00000465269 MAGEC2Q9UBF1 373 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-214ENST00000465269 AGO2Q9UKV8 859 aaKnown RBP15.95■□□□□ 0.14
HDAC6-214ENST00000465269 F8VP50 259 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 PDGFRBP09619 1106 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 TOB1P50616 345 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-214ENST00000465269 SOWAHAQ2M3V2 549 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 FUT11Q495W5 492 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 TAF1BQ53T94 588 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-214ENST00000465269 KCNT1Q5JUK3 1230 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 GRAMD4Q6IC98 578 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 SDE2Q6IQ49 451 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 CXorf38Q8TB03 319 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 KCNV2Q8TDN2 545 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 SNX19Q92543 992 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 BHMTQ93088 406 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 FUBP3Q96I24 572 aaKnown RBP eCLIP15.94■□□□□ 0.14
HDAC6-214ENST00000465269 MKRN2Q9H000 416 aaKnown RBP15.94■□□□□ 0.14
HDAC6-214ENST00000465269 STARD13Q9Y3M8 1113 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 PCDHGB2Q9Y5G2 931 aa15.94■□□□□ 0.14
HDAC6-214ENST00000465269 E2F8A0AVK6 867 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 GABRDO14764 452 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 RRP8O43159 456 aaKnown RBP15.93■□□□□ 0.14
HDAC6-214ENST00000465269 COCHO43405 550 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 JUPP14923 745 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 KCNC4Q03721 635 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 TLE3Q04726 772 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 TARDBPQ13148 414 aaKnown RBP eCLIP15.93■□□□□ 0.14
HDAC6-214ENST00000465269 DNAJC3Q13217 504 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 LY6DQ14210 128 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 FAM124AQ86V42 546 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 TMEM86AQ8N2M4 240 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 KBTBD7Q8WVZ9 684 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 ZHX3Q9H4I2 956 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 USP36Q9P275 1121 aaKnown RBP15.93■□□□□ 0.14
HDAC6-214ENST00000465269 TBC1D14Q9P2M4 693 aa15.93■□□□□ 0.14
HDAC6-214ENST00000465269 TEX51A0A1B0GUA7 166 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 METTL12A8MUP2 240 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 NEDD8-MDP1E9PL57 170 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 H0Y8X5 98 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 H0YCG3 227 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 KRT19P08727 400 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 PFKLP17858 780 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 ANXA13P27216 316 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 PNPLA4P41247 253 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 TPMTP51580 245 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 SF3A1Q15459 793 aaKnown RBP15.92■□□□□ 0.14
HDAC6-214ENST00000465269 PRAMEF14Q5SWL7 426 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 IL27RAQ6UWB1 636 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 C4orf50Q6ZRC1 276 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 USP49Q70CQ1 688 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 CSGALNACT2Q8N6G5 542 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 P2RY11Q96G91 374 aa15.92■□□□□ 0.14
HDAC6-214ENST00000465269 NAF1Q96HR8 494 aaKnown RBP15.92■□□□□ 0.14
HDAC6-214ENST00000465269 C8orf76Q96K31 380 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms