RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 ARID3AQ99856 593 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 PNPLA8Q9NP80 782 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 CISHQ9NSE2 258 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 POLR3BQ9NW08 1133 aaPredicted RBP27.32■■□□□ 1.96
U2AF1-206ENST00000464750 TBC1D14Q9P2M4 693 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 SH3BP1Q9Y3L3 701 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 SPAG17Q6Q759 2223 aa27.32■■□□□ 1.96
U2AF1-206ENST00000464750 CYP26A1O43174 497 aa27.31■■□□□ 1.96
U2AF1-206ENST00000464750 ACO1P21399 889 aaKnown RBP27.31■■□□□ 1.96
U2AF1-206ENST00000464750 PXNP49023 591 aaPredicted RBP27.31■■□□□ 1.96
U2AF1-206ENST00000464750 PPP1R26Q5T8A7 1209 aaPredicted RBP27.31■■□□□ 1.96
U2AF1-206ENST00000464750 LAIR1Q6GTX8 287 aa27.31■■□□□ 1.96
U2AF1-206ENST00000464750 ARMCX3Q9UH62 379 aaPredicted RBP27.31■■□□□ 1.96
U2AF1-206ENST00000464750 SCML2Q9UQR0 700 aa27.31■■□□□ 1.96
U2AF1-206ENST00000464750 ADH1CP00326 375 aa27.3■■□□□ 1.96
U2AF1-206ENST00000464750 IRF1P10914 325 aa27.3■■□□□ 1.96
U2AF1-206ENST00000464750 TATDN2Q93075 761 aa27.3■■□□□ 1.96
U2AF1-206ENST00000464750 ACDQ96AP0 544 aa27.3■■□□□ 1.96
U2AF1-206ENST00000464750 DCHS1Q96JQ0 3298 aa27.3■■□□□ 1.96
U2AF1-206ENST00000464750 GADD45BO75293 160 aaPredicted RBP27.29■■□□□ 1.96
U2AF1-206ENST00000464750 ADH5P11766 374 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 CD44P16070 742 aaKnown RBP27.29■■□□□ 1.96
U2AF1-206ENST00000464750 PPP1R2P41236 205 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 RHBDF2Q6PJF5 856 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.29■■□□□ 1.96
U2AF1-206ENST00000464750 SLC4A11Q8NBS3 891 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 SLC35C1Q96A29 364 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 DHTKD1Q96HY7 919 aaPredicted RBP27.29■■□□□ 1.96
U2AF1-206ENST00000464750 HEXIM2Q96MH2 286 aaKnown RBP27.29■■□□□ 1.96
U2AF1-206ENST00000464750 HHIPQ96QV1 700 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 DUSP16Q9BY84 665 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 COQ4Q9Y3A0 265 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 RALGAPA1Q6GYQ0 2036 aa27.29■■□□□ 1.96
U2AF1-206ENST00000464750 RAD23BP54727 409 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 KLHL10Q6JEL2 608 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 CEP68Q76N32 757 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 SYT13Q7L8C5 426 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 C12orf40Q86WS4 652 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 GPR161Q8N6U8 529 aaKnown RBP27.28■■□□□ 1.96
U2AF1-206ENST00000464750 CCDC26Q8TAB7 109 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 WBP2Q969T9 261 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 RMDN1Q96DB5 314 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 OTUB2Q96DC9 234 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 TMEM176AQ96HP8 235 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 FAM124BQ9H5Z6 455 aaPredicted RBP27.28■■□□□ 1.96
U2AF1-206ENST00000464750 NMUR1Q9HB89 426 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 CYLDQ9NQC7 956 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 OSER1Q9NX31 292 aa27.28■■□□□ 1.96
U2AF1-206ENST00000464750 CCDC163A0A0D9SF12 145 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 TBX18O95935 607 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 KIF11P52732 1056 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 SEC13P55735 322 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 DMC1Q14565 340 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 LY6G5CQ5SRR4 150 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 BBS7Q8IWZ6 715 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 CAMKK1Q8N5S9 505 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 CEP63Q96MT8 703 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 METTL14Q9HCE5 456 aaKnown RBP27.27■■□□□ 1.96
U2AF1-206ENST00000464750 CIZ1Q9ULV3 898 aaPredicted RBP27.27■■□□□ 1.96
U2AF1-206ENST00000464750 USP18Q9UMW8 372 aa27.27■■□□□ 1.96
U2AF1-206ENST00000464750 A0A1W2PQH9 124 aa27.26■■□□□ 1.95
U2AF1-206ENST00000464750 K7EQS6 105 aa27.26■■□□□ 1.95
U2AF1-206ENST00000464750 RETP07949 1114 aa27.26■■□□□ 1.95
U2AF1-206ENST00000464750 EIF2DP41214 584 aaKnown RBP27.26■■□□□ 1.95
U2AF1-206ENST00000464750 SLC6A11P48066 632 aa27.26■■□□□ 1.95
U2AF1-206ENST00000464750 CUL2Q13617 745 aa27.26■■□□□ 1.95
U2AF1-206ENST00000464750 USP33Q8TEY7 942 aa27.26■■□□□ 1.95
U2AF1-206ENST00000464750 DUSP9Q99956 384 aaKnown RBP27.26■■□□□ 1.95
U2AF1-206ENST00000464750 PARD6AQ9NPB6 346 aa27.26■■□□□ 1.95
U2AF1-206ENST00000464750 BMP6P22004 513 aa27.25■■□□□ 1.95
U2AF1-206ENST00000464750 ATP5C1P36542 298 aaKnown RBP27.25■■□□□ 1.95
U2AF1-206ENST00000464750 CCDC40Q4G0X9 1142 aa27.25■■□□□ 1.95
U2AF1-206ENST00000464750 ARHGAP17Q68EM7 881 aa27.25■■□□□ 1.95
U2AF1-206ENST00000464750 CCDC186Q7Z3E2 898 aa27.25■■□□□ 1.95
U2AF1-206ENST00000464750 GAB3Q8WWW8 586 aa27.25■■□□□ 1.95
U2AF1-206ENST00000464750 PNKPQ96T60 521 aa27.25■■□□□ 1.95
U2AF1-206ENST00000464750 KLF16Q9BXK1 252 aaPredicted RBP27.25■■□□□ 1.95
U2AF1-206ENST00000464750 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.25■■□□□ 1.95
U2AF1-206ENST00000464750 NAGPAQ9UK23 515 aa27.25■■□□□ 1.95
U2AF1-206ENST00000464750 CTNND2Q9UQB3 1225 aa27.25■■□□□ 1.95
U2AF1-206ENST00000464750 ANTXRLA6NF34 631 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 BIN1O00499 593 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 RPP40O75818 363 aaKnown RBP27.24■■□□□ 1.95
U2AF1-206ENST00000464750 APODP05090 189 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 RARGP13631 454 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 TGM1P22735 817 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 FMO5P49326 533 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 GAD2Q05329 585 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 KDSRQ06136 332 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 GOLGA8FQ08AF8 430 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 GOLGA8DPQ0D2H9 430 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 SPEM2Q0P670 501 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 MESP2Q0VG99 397 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 MORC3Q14149 939 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 C2orf27AQ580R0 203 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 TTI2Q6NXR4 508 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 FAM160A2Q8N612 972 aaPredicted RBP27.24■■□□□ 1.95
U2AF1-206ENST00000464750 NELFBQ8WX92 580 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 NUDT5Q9UKK9 219 aa27.24■■□□□ 1.95
U2AF1-206ENST00000464750 USP3Q9Y6I4 520 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms