RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 AVENQ9NQS1 362 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 HACD3Q9P035 362 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 AFF4Q9UHB7 1163 aaKnown RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 RIPK3Q9Y572 518 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 FSCN2O14926 492 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 PFDN6O15212 129 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 DCXO43602 365 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 KLHL2O95198 593 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 CHEK2O96017 543 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 CYP2F1P24903 491 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 SLC15A2Q16348 729 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 BMT2Q1RMZ1 405 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 VSIG10LQ86VR7 867 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 EIF1ADQ8N9N8 165 aaKnown RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 EDEM1Q92611 657 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 KCNK16Q96T55 309 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 CAAP1Q9H8G2 361 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 SIX2Q9NPC8 291 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 COL20A1Q9P218 1284 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 NALCNQ8IZF0 1738 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 WDR27A2RRH5 827 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 LIASO43766 372 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 DNAJC8O75937 253 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 KRT36O76013 467 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 UNC5CO95185 931 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 IL18RAPO95256 599 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 S100BP04271 92 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 MCF2P10911 925 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 CYP2B6P20813 491 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 CALB2P22676 271 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 DRG2P55039 364 aaKnown RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 NOMO3P69849 1222 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 PDK1Q15118 436 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 ZACNQ401N2 412 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 STRA8Q7Z7C7 330 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 WDR49Q8IV35 697 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 RASGEF1CQ8N431 466 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 FITM2Q8N6M3 262 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 SPDYE1Q8NFV5 336 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 JOSD2Q8TAC2 188 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 PYDC1Q8WXC3 89 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 NMD3Q96D46 503 aaKnown RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 SLITRK1Q96PX8 696 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 ACSS2Q9NR19 701 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 SLC17A7Q9P2U7 560 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 BTNL10A8MVZ5 291 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 RALBP11234 206 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 VDRP11473 427 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 DSG3P32926 999 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 NRLP54845 237 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 PREPLQ4J6C6 727 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 XRRA1Q6P2D8 792 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 MTHFD1LQ6UB35 978 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 KCNT2Q6UVM3 1135 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 UNC45BQ8IWX7 931 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 EFHBQ8N7U6 833 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 COLGALT1Q8NBJ5 622 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 PPCSQ9HAB8 311 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 IARS2Q9NSE4 1012 aaKnown RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 ARHGEF38Q9NXL2 777 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.39□□□□□ -0.91
HPS4-208ENST00000464362 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.39□□□□□ -0.91
HPS4-208ENST00000464362 THEGQ9P2T0 379 aa9.39□□□□□ -0.91
HPS4-208ENST00000464362 ASB14A6NK59 587 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 SPTLC1O15269 473 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 B4GALT5O43286 388 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 MICAL2O94851 1124 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 KDELR1P24390 212 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 MGAT1P26572 445 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 GRIK1P39086 918 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 HADHAP40939 763 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 PLK1P53350 603 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 TSPY1Q01534 308 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 DPYSL3Q14195 570 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 R3HDM1Q15032 1099 aaKnown RBP9.38□□□□□ -0.91
HPS4-208ENST00000464362 KATNAL2Q8IYT4 538 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 C12orf29Q8N999 325 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 STK32AQ8WU08 396 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 SNTG2Q9NY99 539 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 SDR42E2A6NKP2 422 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 LACTBL1A8MY62 500 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 SNX2O60749 519 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 CST3P01034 146 aaPredicted RBP9.38□□□□□ -0.91
HPS4-208ENST00000464362 EEF1DP29692 281 aaKnown RBP9.38□□□□□ -0.91
HPS4-208ENST00000464362 SLC1A5Q15758 541 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 NBPF20Q3BBV1 942 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 EEF1DP3Q658K8 133 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 SLC9A9Q8IVB4 645 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 BRSK2Q8IWQ3 736 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 ATPAF2Q8N5M1 289 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 SNRNP27Q8WVK2 155 aaKnown RBP9.38□□□□□ -0.91
HPS4-208ENST00000464362 OXNAD1Q96HP4 312 aaPredicted RBP9.38□□□□□ -0.91
HPS4-208ENST00000464362 MRPL1Q9BYD6 325 aaKnown RBP9.38□□□□□ -0.91
HPS4-208ENST00000464362 LRRC4CQ9HCJ2 640 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 MAN1C1Q9NR34 630 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 NUDT5Q9UKK9 219 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 LZTS1Q9Y250 596 aa9.38□□□□□ -0.91
HPS4-208ENST00000464362 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
HPS4-208ENST00000464362 SUPT7LO94864 414 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms