RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 TRPC3Q13507 836 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 GRM2Q14416 872 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 TRIP13Q15645 432 aaPredicted RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 CERKLQ49MI3 558 aaPredicted RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 FSCBQ5H9T9 825 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 ACBD5Q5T8D3 534 aaPredicted RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 PLEKHA7Q6IQ23 1121 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 ZFP1Q6P2D0 407 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 DSTYKQ6XUX3 929 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 MIER3Q7Z3K6 550 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 HAUS6Q7Z4H7 955 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 DHDDSQ86SQ9 333 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 SPATA24Q86W54 205 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 ULK2Q8IYT8 1036 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 RDM1Q8NG50 284 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 OR6Y1Q8NGX8 325 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 HELQQ8TDG4 1101 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 CHURC1Q8WUH1 139 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 RSAD2Q8WXG1 361 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 ATG4AQ8WYN0 398 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 DDX1Q92499 740 aaKnown RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 ATP2A3Q93084 1043 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 LRRC39Q96DD0 335 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 CMTM5Q96DZ9 223 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 MFSD14AQ96MC6 490 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 NLRP4Q96MN2 994 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 KREMEN1Q96MU8 473 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 KCNK16Q96T55 309 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 PAFAH2Q99487 392 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 SERPINI1Q99574 410 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 MIPEPQ99797 713 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 LXNQ9BS40 222 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 GCOM2Q9BZD3 368 aaPredicted RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 S100A14Q9HCY8 104 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 PNPLA8Q9NP80 782 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 ANKEF1Q9NU02 776 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 ARL8BQ9NVJ2 186 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 C6orf203Q9P0P8 240 aaPredicted RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 PPARGC1AQ9UBK2 798 aaKnown RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 ITGA11Q9UKX5 1188 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 PADI4Q9UM07 663 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 APOBEC2Q9Y235 224 aaKnown RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 PPME1Q9Y570 386 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 SNCAIPQ9Y6H5 919 aa7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.49□□□□□ -1.21
CLSTN1-204ENST00000464286 DCDC2BA2VCK2 349 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 SFI1A8K8P3 1242 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TLR3O15455 904 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM189A1O60320 539 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 PLA2G6O60733 806 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 SNRPAP09012 282 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 VIL1P09327 827 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 UBTFL6P0CB48 400 aaPredicted RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MYL2P10916 166 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 CETPP11597 493 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 CCDC130P13994 396 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 AOC1P19801 751 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 ADRA1DP25100 572 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 GCAP28676 217 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TM4SF1P30408 202 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 ADSSP30520 456 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 STIP1P31948 543 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 PIK3CAP42336 1068 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 QARSP47897 775 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TUBP50607 506 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 PSMD7P51665 324 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 NEK3P51956 506 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 JAK3P52333 1124 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 CHN2P52757 468 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 NCKAP1LP55160 1127 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 EIF6P56537 245 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 YWHAEP62258 255 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 SNRPNP63162 240 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 NOP14P78316 857 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 DMP1Q13316 513 aaPredicted RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 PICALMQ13492 652 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 COG2Q14746 738 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 ACAP1Q15027 740 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MAPK6Q16659 721 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TBC1D25Q3MII6 688 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 WDR72Q3MJ13 1102 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MMEL1Q495T6 779 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 ANKRD20A4Q4UJ75 823 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 PABPC1LQ4VXU2 614 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TBCELQ5QJ74 424 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 RARS2Q5T160 578 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 BORAQ6PGQ7 559 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 NSMFQ6X4W1 530 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 SPOCD1Q6ZMY3 1216 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 C3orf62Q6ZUJ4 267 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MON1BQ7L1V2 547 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 PODNQ7Z5L7 613 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 SETD3Q86TU7 594 aaPredicted RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 FAM160B2Q86V87 743 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 SLC26A11Q86WA9 606 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 PDSS2Q86YH6 399 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 MCF2L2Q86YR7 1114 aa7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 DHX37Q8IY37 1157 aaKnown RBP7.48□□□□□ -1.21
CLSTN1-204ENST00000464286 ABRAQ8N0Z2 381 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms