RNA–Protein interactions for RNA: ENST00000463479.1

PLOD3-210, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-210ENST00000463479 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
PLOD3-210ENST00000463479 CACTINQ8WUQ7 758 aaKnown RBP13.73□□□□□ -0.21
PLOD3-210ENST00000463479 MTMR12Q9C0I1 747 aa13.73□□□□□ -0.21
PLOD3-210ENST00000463479 PDE11AQ9HCR9 933 aa13.73□□□□□ -0.21
PLOD3-210ENST00000463479 MAGEC2Q9UBF1 373 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-210ENST00000463479 EVLQ9UI08 416 aaPredicted RBP13.73□□□□□ -0.21
PLOD3-210ENST00000463479 IGF2RP11717 2491 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 TNRC6BQ9UPQ9 1833 aaKnown RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 SCAMP3O14828 347 aaKnown RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 KLF8O95600 359 aaPredicted RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 LMO2P25791 158 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 PSMC2P35998 433 aaKnown RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 ZNF165P49910 485 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 PDE6CP51160 858 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 PMS1P54277 932 aaKnown RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 MRPS21P82921 87 aaKnown RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 RBP5P82980 135 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 SURF1Q15526 300 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 SNRNP35Q16560 246 aaKnown RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 CCDC40Q4G0X9 1142 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 TRIM61Q5EBN2 209 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 KIAA1211LQ6NV74 962 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 TTI2Q6NXR4 508 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 C4orf50Q6ZRC1 276 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 C11orf57Q6ZUT1 292 aaPredicted RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 ARMCX6Q7L4S7 300 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 LPCAT2Q7L5N7 544 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 FILIP1Q7Z7B0 1213 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 FAM114A1Q8IWE2 563 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 ADGRG2Q8IZP9 1017 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 FRMD1Q8N878 549 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 IL17RCQ8NAC3 791 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 TXNDC5Q8NBS9 432 aaKnown RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 KBTBD7Q8WVZ9 684 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 MYLPFQ96A32 169 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 SPATA17Q96L03 361 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 CEP63Q96MT8 703 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 FNBP1Q96RU3 617 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 SYT15Q9BQS2 421 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 SRRTQ9BXP5 876 aaKnown RBP13.72□□□□□ -0.21
PLOD3-210ENST00000463479 CRTAC1Q9NQ79 661 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 TMEM74BQ9NUR3 256 aa13.72□□□□□ -0.21
PLOD3-210ENST00000463479 ASCC3Q8N3C0 2202 aaKnown RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 SRRM3A6NNA2 597 aaPredicted RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 SGK1O00141 431 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 HYAL3O43820 417 aaPredicted RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 ALDH1A2O94788 518 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 GNA14O95837 355 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 TMEM191BP0C7N4 346 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 PFKLP17858 780 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 BDNFP23560 247 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 TIE1P35590 1138 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 GRIK1P39086 918 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 PTGER3P43115 390 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 MAPK8P45983 427 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 SLC6A11P48066 632 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 MYL5Q02045 173 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 LMAN2Q12907 356 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 DHCR24Q15392 516 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 ZCWPW2Q504Y3 356 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 EMC10Q5UCC4 262 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 LMBRD2Q68DH5 695 aaPredicted RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 FOXR2Q6PJQ5 311 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 VSTM1Q6UX27 236 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 LIMS2Q7Z4I7 341 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 C12orf40Q86WS4 652 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 FAM186BQ8IYM0 893 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 TMEFF1Q8IYR6 380 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 ENOX1Q8TC92 643 aaKnown RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 ZCCHC14Q8WYQ9 949 aaKnown RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 EEF2KMTQ96G04 330 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 FUCA2Q9BTY2 467 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 NUSAP1Q9BXS6 441 aaKnown RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 RNF38Q9H0F5 515 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 ZDHHC4Q9NPG8 344 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 SMPD4Q9NXE4 827 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 MBD1Q9UIS9 605 aaPredicted RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 CDH9Q9ULB4 789 aa13.71□□□□□ -0.21
PLOD3-210ENST00000463479 R3HCC1Q9Y3T6 440 aaKnown RBP13.71□□□□□ -0.21
PLOD3-210ENST00000463479 PTPRJQ12913 1337 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 ATXN2Q99700 1313 aaKnown RBP13.7□□□□□ -0.22
PLOD3-210ENST00000463479 BAHCC1Q9P281 2608 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 ZNF840PA6NDX5 716 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 GOLGA6L19H0YKK7 550 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 TNFRSF10BO14763 440 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 SLC16A3O15427 465 aaKnown RBP13.7□□□□□ -0.22
PLOD3-210ENST00000463479 MAP3K13O43283 966 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 KAT7O95251 611 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 PDGFRBP09619 1106 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 ENGP17813 658 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 CDK11BP21127 795 aaKnown RBP13.7□□□□□ -0.22
PLOD3-210ENST00000463479 KIR2DL1P43626 348 aaPredicted RBP13.7□□□□□ -0.22
PLOD3-210ENST00000463479 ZNF445P59923 1031 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 SLC7A9P82251 487 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 DENND5BQ6ZUT9 1274 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 DPH6Q7L8W6 267 aa13.7□□□□□ -0.22
PLOD3-210ENST00000463479 CBWD2Q8IUF1 395 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms