RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 TBC1D3BA6NDS4 549 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 UPK3BL1B0FP48 263 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 UPK3BL2E5RIL1 263 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 DLATP10515 647 aaKnown RBP16.66■□□□□ 0.26
SND1-203ENST00000463020 IRF1P10914 325 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 NDUFV2P19404 249 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 MAPRE1Q15691 268 aaKnown RBP16.66■□□□□ 0.26
SND1-203ENST00000463020 HSF5Q4G112 596 aaPredicted RBP16.66■□□□□ 0.26
SND1-203ENST00000463020 C10orf76Q5T2E6 689 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 TDRD10Q5VZ19 366 aaKnown RBP16.66■□□□□ 0.26
SND1-203ENST00000463020 TOGARAM2Q6ZUX3 1019 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 WDR49Q8IV35 697 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 PLEKHO2Q8TD55 490 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 CEP295NLQ96MC4 621 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 XYLT2Q9H1B5 865 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 SNX25Q9H3E2 840 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 SLC32A1Q9H598 525 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 SMYD3Q9H7B4 428 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 GMIPQ9P107 970 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 SLC6A14Q9UN76 642 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 RAD54BQ9Y620 910 aa16.66■□□□□ 0.26
SND1-203ENST00000463020 CEP192Q8TEP8 1941 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 E2F8A0AVK6 867 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 ZNF233A6NK53 670 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 SLC9A3R1O14745 358 aaPredicted RBP16.65■□□□□ 0.26
SND1-203ENST00000463020 HOXC11O43248 304 aaPredicted RBP16.65■□□□□ 0.26
SND1-203ENST00000463020 TGFB1I1O43294 461 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 TACC1O75410 805 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 GJB3O75712 270 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 SERPINF2P08697 491 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 YWHAQP27348 245 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 CDH8P55286 799 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 MYL6P60660 151 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 ZNF33AQ06730 810 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 GSE1Q14687 1217 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 ACAP1Q15027 740 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 DUOXA1Q1HG43 343 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 C19orf48Q6RUI8 117 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 RAB44Q7Z6P3 723 aaPredicted RBP16.65■□□□□ 0.26
SND1-203ENST00000463020 PDILTQ8N807 584 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 KIAA1958Q8N8K9 716 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 PNPLA1Q8N8W4 532 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 TERB1Q8NA31 727 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 B3GALNT2Q8NCR0 500 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 FBXO32Q969P5 355 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 SDCBP2Q9H190 292 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 CYP8B1Q9UNU6 501 aa16.65■□□□□ 0.26
SND1-203ENST00000463020 FAM221BA6H8Z2 402 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 PRRT4C9JH25 899 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 CLIC2O15247 247 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 SH3BP5O60239 455 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 BEST1O76090 585 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 TBX18O95935 607 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 HOXB2P14652 356 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 PTMSP20962 102 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 STAT6P42226 847 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 PPP3CCP48454 512 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 CASP4P49662 377 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 SLC5A3P53794 718 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 GAD2Q05329 585 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 GFPT1Q06210 699 aaPredicted RBP16.64■□□□□ 0.25
SND1-203ENST00000463020 ORC1Q13415 861 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 ALCAMQ13740 583 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 SNRNP35Q16560 246 aaKnown RBP16.64■□□□□ 0.25
SND1-203ENST00000463020 ANO4Q32M45 955 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 WDR72Q3MJ13 1102 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 SPDYCQ5MJ68 293 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 EPM2AIP1Q7L775 607 aaPredicted RBP16.64■□□□□ 0.25
SND1-203ENST00000463020 FAM35AQ86V20 835 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 NUP93Q8N1F7 819 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 ZMIZ2Q8NF64 920 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 CCDC127Q96BQ5 260 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 HSPA12BQ96MM6 686 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 SLITRK1Q96PX8 696 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 CGRRF1Q99675 332 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 ELOVL4Q9GZR5 314 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 SPHK2Q9NRA0 654 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 AGPAT3Q9NRZ7 376 aa16.64■□□□□ 0.25
SND1-203ENST00000463020 A8MXQ7 604 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.63■□□□□ 0.25
SND1-203ENST00000463020 WASH3PC4AMC7 463 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 ARHGAP33O14559 1287 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 AP5Z1O43299 807 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 OPHN1O60890 802 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 ZDHHC11BP0C7U3 371 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 MAOBP27338 520 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 CYP2J2P51589 502 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 CYP24A1Q07973 514 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 HECTD3Q5T447 861 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 PROSER1Q86XN7 944 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 TRIML1Q8N9V2 468 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 OSER1Q9NX31 292 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 IL37Q9NZH6 218 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 TBC1D14Q9P2M4 693 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 DEC1Q9P2X7 70 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 NXF1Q9UBU9 619 aaKnown RBP16.63■□□□□ 0.25
SND1-203ENST00000463020 HMGXB4Q9UGU5 601 aa16.63■□□□□ 0.25
SND1-203ENST00000463020 CASP1P29466 404 aa16.62■□□□□ 0.25
SND1-203ENST00000463020 NTSR1P30989 418 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms