RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	DUS2	Q9NX74	493 aa	Known RBP	10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	OBP2A	Q9NY56	170 aa		10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	LIMA1	Q9UHB6	759 aa	Known RBP	10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	NDRG2	Q9UN36	371 aa	Known RBP	10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	SCML2	Q9UQR0	700 aa		10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	WNT6	Q9Y6F9	365 aa		10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	PIAS3	Q9Y6X2	628 aa		10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	KMT2E	Q8IZD2	1858 aa		10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	ZNF318	Q5VUA4	2279 aa		10.12	□□□□□ -0.79
PSMD4-208	ENST00000462970	LGALS16	A8MUM7	142 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	LEFTY2	O00292	366 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	FOXN3	O00409	490 aa	Predicted RBP	10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	MDM4	O15151	490 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	TLR5	O60602	858 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	TBX18	O95935	607 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	ZBED1	O96006	694 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	OAS1	P00973	400 aa	Known RBP	10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	RALA	P11233	206 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	RARG	P13631	454 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	ARSA	P15289	507 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	WEE1	P30291	646 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	PLCB2	Q00722	1185 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	PTK2	Q05397	1052 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	FCHO2	Q0JRZ9	810 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	ZNF268	Q14587	947 aa	Predicted RBP	10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	DRAP1	Q14919	205 aa	Predicted RBP	10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	ITPRIPL2	Q3MIP1	535 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	KLHDC7A	Q5VTJ3	777 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	ASTL	Q6HA08	431 aa	Predicted RBP	10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	BMP8A	Q7Z5Y6	402 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	ALYREF	Q86V81	257 aa	Known RBP	10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	MIB1	Q86YT6	1006 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	PASD1	Q8IV76	773 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	DHX40	Q8IX18	779 aa	Known RBP	10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	NEK11	Q8NG66	645 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	RIN3	Q8TB24	985 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	SHC3	Q92529	594 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	BPIFA3	Q9BQP9	254 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	MIS12	Q9H081	205 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	CBX8	Q9HC52	389 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	NLRC4	Q9NPP4	1024 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	GTSE1	Q9NYZ3	720 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	IL37	Q9NZH6	218 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	RASAL2	Q9UJF2	1139 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	ARHGAP26	Q9UNA1	814 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	SH3BP1	Q9Y3L3	701 aa		10.11	□□□□□ -0.79
PSMD4-208	ENST00000462970	COL4A2	P08572	1712 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	FAM170B	A6NMN3	283 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	GOLGA6L19	H0YKK7	550 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	PI15	O43692	258 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	SERPINC1	P01008	464 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	DCN	P07585	359 aa	Known RBP	10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	HMBS	P08397	361 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	UCHL3	P15374	230 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	ZNF18	P17022	549 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	PFKL	P17858	780 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	AVPR2	P30518	371 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	KRT9	P35527	623 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	ATP5C1	P36542	298 aa	Known RBP	10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	PLA2G4A	P47712	749 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	POLR2F	P61218	127 aa	Known RBP	10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	YWHAG	P61981	247 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	SLC7A9	P82251	487 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	PRKCQ	Q04759	706 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	EFEMP1	Q12805	493 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	USP4	Q13107	963 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	PDGFRL	Q15198	375 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	NFKBIB	Q15653	356 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	ZNF77	Q15935	545 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	FILIP1L	Q4L180	1135 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	TAF3	Q5VWG9	929 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	BTBD8	Q5XKL5	378 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	CWF19L1	Q69YN2	538 aa	Known RBP	10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	PMF1	Q6P1K2	205 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	ZNF852	Q6ZMS4	543 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	CCDC186	Q7Z3E2	898 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	SCD5	Q86SK9	330 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	LUZP1	Q86V48	1076 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	DDX42	Q86XP3	938 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	ARHGAP18	Q8N392	663 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	CPA6	Q8N4T0	437 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	RNF139	Q8WU17	664 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	ZNF606	Q8WXB4	792 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	EDEM1	Q92611	657 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	GOLGA1	Q92805	767 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	SPAG5	Q96R06	1193 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	FUCA2	Q9BTY2	467 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	UBXN6	Q9BZV1	441 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	LINC00597	Q9H2U6	94 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	OSER1	Q9NX31	292 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	CNTN6	Q9UQ52	1028 aa		10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	MRPS17	Q9Y2R5	130 aa	Known RBP	10.1	□□□□□ -0.79
PSMD4-208	ENST00000462970	MUC6	Q6W4X9	2439 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	KANSL1L	A0AUZ9	987 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	FAM92A	A1XBS5	289 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	SPECC1L-ADORA2A	F8WAN1	911 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	MAN2B1	O00754	1011 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	GFPT2	O94808	682 aa		10.09	□□□□□ -0.79
PSMD4-208	ENST00000462970	ZDHHC11B	P0C7U3	371 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms