RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ZSWIM1Q9BR11 485 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 CYLDQ9NQC7 956 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 APEX2Q9UBZ4 518 aa19.85■□□□□ 0.77
COL9A3-203ENST00000462700 CALCAP01258 141 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 SETSIPP0DME0 302 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 KRT5P13647 590 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 BRD2P25440 801 aaKnown RBP19.84■□□□□ 0.77
COL9A3-203ENST00000462700 EEF1GP26641 437 aaKnown RBP19.84■□□□□ 0.77
COL9A3-203ENST00000462700 RPS9P46781 194 aaKnown RBP19.84■□□□□ 0.77
COL9A3-203ENST00000462700 MFAP3P55082 362 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 APBA1Q02410 837 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 NHLH1Q02575 133 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 STILQ15468 1287 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 CNGA2Q16280 664 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 PKDCCQ504Y2 493 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 CPA6Q8N4T0 437 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 UBA3Q8TBC4 463 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 ATP2A3Q93084 1043 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 NACA2Q9H009 215 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 CFAP97Q9P2B7 532 aa19.84■□□□□ 0.77
COL9A3-203ENST00000462700 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.84■□□□□ 0.77
COL9A3-203ENST00000462700 HELZP42694 1942 aaKnown RBP19.84■□□□□ 0.77
COL9A3-203ENST00000462700 H0Y858 1186 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 PLA2G5P39877 138 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 PLA2G4AP47712 749 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 PSEN1P49768 467 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 TKTL1P51854 596 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 ANGPT1Q15389 498 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 CDKAL1Q5VV42 579 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 SCD5Q86SK9 330 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 FAM122AQ96E09 287 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 CHFRQ96EP1 664 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 IRF2BPLQ9H1B7 796 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 LINC00597Q9H2U6 94 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 ECT2Q9H8V3 914 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 SIX2Q9NPC8 291 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.83■□□□□ 0.77
COL9A3-203ENST00000462700 NAGPAQ9UK23 515 aa19.83■□□□□ 0.77
COL9A3-203ENST00000462700 M0QYV0 167 aa19.82■□□□□ 0.76
COL9A3-203ENST00000462700 TBX18O95935 607 aa19.82■□□□□ 0.76
COL9A3-203ENST00000462700 CHRNB1P11230 501 aa19.82■□□□□ 0.76
COL9A3-203ENST00000462700 RARGP13631 454 aa19.82■□□□□ 0.76
COL9A3-203ENST00000462700 KCTD13Q8WZ19 329 aa19.82■□□□□ 0.76
COL9A3-203ENST00000462700 LRRC4Q9HBW1 653 aa19.82■□□□□ 0.76
COL9A3-203ENST00000462700 CLIC5Q9NZA1 410 aa19.82■□□□□ 0.76
COL9A3-203ENST00000462700 MYO16Q9Y6X6 1858 aa19.82■□□□□ 0.76
COL9A3-203ENST00000462700 E2F8A0AVK6 867 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 PES1O00541 588 aaKnown RBP19.81■□□□□ 0.76
COL9A3-203ENST00000462700 SLC9A3R1O14745 358 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-203ENST00000462700 SCAMP3O14828 347 aaKnown RBP19.81■□□□□ 0.76
COL9A3-203ENST00000462700 NFATC1O95644 943 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 ZBED1O96006 694 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 GJA4P35212 333 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 ATP5C1P36542 298 aaKnown RBP19.81■□□□□ 0.76
COL9A3-203ENST00000462700 MYL5Q02045 173 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 TYRO3Q06418 890 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 PON2Q15165 354 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 ARHGAP44Q17R89 818 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 PM20D1Q6GTS8 502 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 CAVIN1Q6NZI2 390 aaKnown RBP19.81■□□□□ 0.76
COL9A3-203ENST00000462700 KLHDC10Q6PID8 442 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 C1orf210Q8IVY1 113 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 ARHGAP18Q8N392 663 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 ZNF276Q8N554 614 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 SLC35F5Q8WV83 523 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 SECISBP2LQ93073 1101 aaKnown RBP19.81■□□□□ 0.76
COL9A3-203ENST00000462700 ULBP1Q9BZM6 244 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 LMAN1LQ9HAT1 526 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 FANCLQ9NW38 375 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 TAB2Q9NYJ8 693 aa19.81■□□□□ 0.76
COL9A3-203ENST00000462700 AJAP1Q9UKB5 411 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-203ENST00000462700 BECN2A8MW95 431 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 IRF1P10914 325 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 RALAP11233 206 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 AMPD2Q01433 879 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 ADIGQ0VDE8 80 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 LRRC32Q14392 662 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 DPY19L2P1Q6NXN4 242 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 BHLHA9Q7RTU4 235 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 TADA2BQ86TJ2 420 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 SHC3Q92529 594 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 KLF16Q9BXK1 252 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-203ENST00000462700 CHRDQ9H2X0 955 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 SPATA6Q9NWH7 488 aaPredicted RBP19.8■□□□□ 0.76
COL9A3-203ENST00000462700 DNAJC12Q9UKB3 198 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 NUDT5Q9UKK9 219 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 SH3BP1Q9Y3L3 701 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 MYH10P35580 1976 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 MIA3Q5JRA6 1907 aa19.8■□□□□ 0.76
COL9A3-203ENST00000462700 TRDMT1O14717 391 aaKnown RBP19.79■□□□□ 0.76
COL9A3-203ENST00000462700 MDM4O15151 490 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 GNA15P30679 374 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 YWHAGP61981 247 aaKnown RBP eCLIP19.79■□□□□ 0.76
COL9A3-203ENST00000462700 KCNMA1Q12791 1236 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 NR1H3Q13133 447 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 KRT31Q15323 416 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 C10orf120Q5SQS8 335 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 SMYD5Q6GMV2 418 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 PMF1Q6P1K2 205 aa19.79■□□□□ 0.76
COL9A3-203ENST00000462700 ADGRG2Q8IZP9 1017 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms