RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 TTC17Q96AE7 1141 aa17.64■□□□□ 0.41
ACTB-207ENST00000462494 FAM111AQ96PZ2 611 aa17.64■□□□□ 0.41
ACTB-207ENST00000462494 LRMDAQ9H2I8 198 aa17.64■□□□□ 0.41
ACTB-207ENST00000462494 EBF2Q9HAK2 575 aa17.64■□□□□ 0.41
ACTB-207ENST00000462494 USP29Q9HBJ7 922 aa17.64■□□□□ 0.41
ACTB-207ENST00000462494 PAK5Q9P286 719 aa17.64■□□□□ 0.41
ACTB-207ENST00000462494 A0A0G2JND7 137 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 APOL1O14791 398 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 CHADO15335 359 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 FAM155BO75949 473 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 ZBED1O96006 694 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 TSHRP16473 764 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 OSBPP22059 807 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 PPP6R3Q5H9R7 873 aaPredicted RBP17.63■□□□□ 0.41
ACTB-207ENST00000462494 PRPF39Q86UA1 669 aaKnown RBP17.63■□□□□ 0.41
ACTB-207ENST00000462494 LRRC6Q86X45 466 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 ZNF276Q8N554 614 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 SLC44A1Q8WWI5 657 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 TACO1Q9BSH4 297 aaKnown RBP17.63■□□□□ 0.41
ACTB-207ENST00000462494 MIS12Q9H081 205 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 VPS11Q9H270 941 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 GBA2Q9HCG7 927 aaPredicted RBP17.63■□□□□ 0.41
ACTB-207ENST00000462494 NOP53Q9NZM5 478 aaKnown RBP17.63■□□□□ 0.41
ACTB-207ENST00000462494 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.63■□□□□ 0.41
ACTB-207ENST00000462494 APRTP07741 180 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 T-ENOLP0DO92 83 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 IL4RP24394 825 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 POU5F1BQ06416 359 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 CA9Q16790 459 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 ANKRD13AQ8IZ07 590 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 AGGF1Q8N302 714 aaeCLIP17.63■□□□□ 0.41
ACTB-207ENST00000462494 PPM1NQ8N819 430 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 NSMCE1Q8WV22 266 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 AFG1LQ8WV93 481 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 MROH8Q9H579 483 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 GINS2Q9Y248 185 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 SNX9Q9Y5X1 595 aa17.63■□□□□ 0.41
ACTB-207ENST00000462494 ASB14A6NK59 587 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 C2CD2LO14523 706 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 TSPAN1O60635 241 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 SDC4P31431 198 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 ELF1P32519 619 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 LAMC2Q13753 1193 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 PDK2Q15119 407 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 BOLA3Q53S33 107 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 PQLC3Q8N755 202 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 MRPL45Q9BRJ2 306 aaKnown RBP17.62■□□□□ 0.41
ACTB-207ENST00000462494 TSSK1BQ9BXA7 367 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 CXCL16Q9H2A7 254 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 ADARB2Q9NS39 739 aaKnown RBP17.62■□□□□ 0.41
ACTB-207ENST00000462494 KIAA1257Q9ULG3 409 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 C2CD2Q9Y426 696 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 SPDYE5A6NIY4 337 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 YWHAZP63104 245 aaKnown RBP17.62■□□□□ 0.41
ACTB-207ENST00000462494 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
ACTB-207ENST00000462494 SLC45A4Q5BKX6 768 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 LONP2Q86WA8 852 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 TTC30AQ86WT1 665 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 CCDC33Q8N5R6 958 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 PCDH19Q8TAB3 1148 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 CCDC110Q8TBZ0 833 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 APOPT1Q96IL0 206 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 SNRNP25Q9BV90 132 aaKnown RBP17.62■□□□□ 0.41
ACTB-207ENST00000462494 B3GNT5Q9BYG0 378 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 PCDH18Q9HCL0 1135 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 C15orf41Q9Y2V0 281 aa17.62■□□□□ 0.41
ACTB-207ENST00000462494 DIAPH2O60879 1101 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 KYAT1Q16773 422 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 PARP6Q2NL67 630 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 MTHFD1LQ6UB35 978 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 OLFML1Q6UWY5 402 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 OPTNQ96CV9 577 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 SLC7A6OSQ96CW6 309 aaPredicted RBP17.61■□□□□ 0.41
ACTB-207ENST00000462494 LPIN3Q9BQK8 851 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 TBC1D10AQ9BXI6 508 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 TRIM55Q9BYV6 548 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 KLC2Q9H0B6 622 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 CXorf56Q9H5V9 222 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 RNF19AQ9NV58 838 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 ZC3H7BQ9UGR2 993 aaKnown RBP17.61■□□□□ 0.41
ACTB-207ENST00000462494 NUMBLQ9Y6R0 609 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 KAT6AQ92794 2004 aa17.61■□□□□ 0.41
ACTB-207ENST00000462494 PPEF2O14830 753 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 CYP2C8P10632 490 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 BGNP21810 368 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 TGM2P21980 687 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 EPHB2P29323 1055 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 RASSF2P50749 326 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 SLC6A3Q01959 620 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 IFNLR1Q8IU57 520 aaPredicted RBP17.6■□□□□ 0.41
ACTB-207ENST00000462494 LINC01465Q8N7H1 131 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 INPP5DQ92835 1189 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 IQCGQ9H095 443 aaKnown RBP17.6■□□□□ 0.41
ACTB-207ENST00000462494 ETNK2Q9NVF9 386 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 TRIM49D1C9J1S8 452 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 SPAG6O75602 509 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 TFE3P19532 575 aaPredicted RBP17.6■□□□□ 0.41
ACTB-207ENST00000462494 NEK3P51956 506 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 CLNKQ7Z7G1 428 aa17.6■□□□□ 0.41
ACTB-207ENST00000462494 RPAINQ86UA6 219 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms