RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 MTAPQ13126 283 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 EXOC3L4Q17RC7 722 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 C1orf220Q5T0J3 134 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 PPP1R26Q5T8A7 1209 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-216ENST00000462421 CLEC20AQ6ZU45 233 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-216ENST00000462421 MIB1Q86YT6 1006 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 ZC3H3Q8IXZ2 948 aaKnown RBP9.42□□□□□ -0.9
DDX39B-216ENST00000462421 ANKRD52Q8NB46 1076 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 SCAMP5Q8TAC9 235 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 SEMA4DQ92854 862 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 CLDN23Q96B33 292 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 PCMTD1Q96MG8 357 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-216ENST00000462421 UBXN6Q9BZV1 441 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 INTS2Q9H0H0 1204 aaKnown RBP9.42□□□□□ -0.9
DDX39B-216ENST00000462421 GZF1Q9H116 711 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-216ENST00000462421 CSNK1G1Q9HCP0 422 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 UBE2TQ9NPD8 197 aaPredicted RBP9.42□□□□□ -0.9
DDX39B-216ENST00000462421 ST7Q9NRC1 585 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 ANO10Q9NW15 660 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 TSPAN16Q9UKR8 245 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 COQ4Q9Y3A0 265 aa9.42□□□□□ -0.9
DDX39B-216ENST00000462421 TECTAO75443 2155 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 CAPN9O14815 690 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 XPO1O14980 1071 aaKnown RBP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 CYP26A1O43174 497 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 FBXO21O94952 628 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 ZBED1O96006 694 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 OAS1P00973 400 aaKnown RBP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 CD44P16070 742 aaKnown RBP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 CNR2P34972 360 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 ACADSBP45954 432 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 TKTL1P51854 596 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 RAD23BP54727 409 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 BPIFB4P59827 614 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 YWHAGP61981 247 aaKnown RBP eCLIP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 SYCP1Q15431 976 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 MAN2A1Q16706 1144 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 ARHGAP17Q68EM7 881 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 SCARA3Q6AZY7 606 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 PRR23BQ6ZRT6 265 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 CCDC186Q7Z3E2 898 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 TMEM150AQ86TG1 271 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 TTC30AQ86WT1 665 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 GPR161Q8N6U8 529 aaKnown RBP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 EHBP1Q8NDI1 1231 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 TATDN2Q93075 761 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 RSPRY1Q96DX4 576 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 PNKPQ96T60 521 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 SMOQ99835 787 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 DDX50Q9BQ39 737 aaKnown RBP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 FAM83CQ9BQN1 747 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 MIS12Q9H081 205 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 CCSER2Q9H7U1 834 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 CLIC5Q9NZA1 410 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 BCCIPQ9P287 314 aaKnown RBP eCLIP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 WDR35Q9P2L0 1181 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 DEC1Q9P2X7 70 aa9.41□□□□□ -0.9
DDX39B-216ENST00000462421 MTF2Q9Y483 593 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-216ENST00000462421 A0A1W2PQH9 124 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 TBC1D3BA6NDS4 549 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 ARNTLO00327 626 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 TRDMT1O14717 391 aaKnown RBP9.4□□□□□ -0.9
DDX39B-216ENST00000462421 THAP12O43422 761 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 LRRN2O75325 713 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 LCP1P13796 627 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 DESP17661 470 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 GNA15P30679 374 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 GJA4P35212 333 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 KRT9P35527 623 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 CHKAP35790 457 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 KIF11P52732 1056 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 CACNA2D1P54289 1103 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 SEC13P55735 322 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 MARSP56192 900 aaKnown RBP9.4□□□□□ -0.9
DDX39B-216ENST00000462421 ZNF445P59923 1031 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 PTK2Q05397 1052 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 ADIGQ0VDE8 80 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 EFEMP1Q12805 493 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 BYSLQ13895 437 aaKnown RBP9.4□□□□□ -0.9
DDX39B-216ENST00000462421 STX1AQ16623 288 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 ARHGAP44Q17R89 818 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 EML3Q32P44 896 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 SNX30Q5VWJ9 437 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 GRAMD4Q6IC98 578 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 KLHDC10Q6PID8 442 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 RRAGAQ7L523 313 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 PIGZQ86VD9 579 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 C11orf74Q86VG3 221 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 TRIM59Q8IWR1 403 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 ZNF557Q8N988 423 aaPredicted RBP9.4□□□□□ -0.9
DDX39B-216ENST00000462421 SLC4A11Q8NBS3 891 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 IPO4Q8TEX9 1081 aaKnown RBP9.4□□□□□ -0.9
DDX39B-216ENST00000462421 UCMAQ8WVF2 138 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 FAM149B1Q96BN6 582 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 SPACA7Q96KW9 195 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 TWNKQ96RR1 684 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 ARID3AQ99856 593 aa9.4□□□□□ -0.9
DDX39B-216ENST00000462421 DUSP9Q99956 384 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms