RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.19□□□□□ -0.62
RTF1-202ENST00000462276 SLC7A14Q8TBB6 771 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 GDPD5Q8WTR4 605 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 FBXO32Q969P5 355 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 FAM149B1Q96BN6 582 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 ARHGEF26Q96DR7 871 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 SLC2A13Q96QE2 648 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 CNPY3Q9BT09 278 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 ABCC13Q9NSE7 274 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.19□□□□□ -0.62
RTF1-202ENST00000462276 ZMYM5Q9UJ78 669 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 STAP1Q9ULZ2 295 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 DUSP10Q9Y6W6 482 aa11.19□□□□□ -0.62
RTF1-202ENST00000462276 PTPRSQ13332 1948 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 EPOPA6NHQ4 379 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 GOLGA8SH3BPF8 625 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 DPYSL4O14531 572 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 CAPN9O14815 690 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 ZNF500O60304 480 aaPredicted RBP11.18□□□□□ -0.62
RTF1-202ENST00000462276 RNF8O76064 485 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 PROSCO94903 275 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 LTFP02788 710 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 ZDHHC11BP0C7U3 371 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 RALAP11233 206 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 PDGFRAP16234 1089 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 HMGA1P17096 107 aaKnown RBP11.18□□□□□ -0.62
RTF1-202ENST00000462276 HOXB8P17481 243 aaPredicted RBP11.18□□□□□ -0.62
RTF1-202ENST00000462276 SDC4P31431 198 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 RFC1P35251 1148 aaPredicted RBP11.18□□□□□ -0.62
RTF1-202ENST00000462276 PCK1P35558 622 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 PTPN9P43378 593 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 TUBP50607 506 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 KPNA1P52294 538 aaPredicted RBP11.18□□□□□ -0.62
RTF1-202ENST00000462276 YWHAGP61981 247 aaKnown RBP eCLIP11.18□□□□□ -0.62
RTF1-202ENST00000462276 ETF1P62495 437 aaKnown RBP11.18□□□□□ -0.62
RTF1-202ENST00000462276 TAF10Q12962 218 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 MTA1Q13330 715 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 C2CD6Q53TS8 623 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 ZNF697Q5TEC3 545 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 BSPRYQ5W0U4 402 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 KLHDC10Q6PID8 442 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 GPRIN1Q7Z2K8 1008 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 SLFN11Q7Z7L1 901 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 EFHBQ8N7U6 833 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 STKLD1Q8NE28 680 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 KHSRPQ92945 711 aaKnown RBP eCLIP11.18□□□□□ -0.62
RTF1-202ENST00000462276 MCEEQ96PE7 176 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 DDX23Q9BUQ8 820 aaKnown RBP11.18□□□□□ -0.62
RTF1-202ENST00000462276 MAN1C1Q9NR34 630 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 OLA1Q9NTK5 396 aaKnown RBP11.18□□□□□ -0.62
RTF1-202ENST00000462276 TRPM5Q9NZQ8 1165 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 TJP2Q9UDY2 1190 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 ANAPC7Q9UJX3 599 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 JRKLQ9Y4A0 524 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 PAXBP1Q9Y5B6 917 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 HCFC2Q9Y5Z7 792 aa11.18□□□□□ -0.62
RTF1-202ENST00000462276 CHD7Q9P2D1 2997 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 CLUHO75153 1309 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 YJEFN3A6XGL0 299 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 E7ENQ6 273 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 ZNF197O14709 1029 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 BUB1BO60566 1050 aaPredicted RBP11.17□□□□□ -0.62
RTF1-202ENST00000462276 DAB1O75553 588 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 SOAT2O75908 522 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 PTPN2P17706 415 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 GPD1P21695 349 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 CDC25CP30307 473 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 NRIP1P48552 1158 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 GPR15P49685 360 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 EPHA5P54756 1037 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 RNASE9P60153 205 aaKnown RBP11.17□□□□□ -0.62
RTF1-202ENST00000462276 GNG11P61952 73 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 RPL7AP62424 266 aaKnown RBP11.17□□□□□ -0.62
RTF1-202ENST00000462276 KCNC3Q14003 757 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 SLC25A52Q3SY17 297 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 LRRC38Q5VT99 294 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 BTBD8Q5XKL5 378 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 STRADAQ7RTN6 431 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 BHLHA9Q7RTU4 235 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 DAAM2Q86T65 1068 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 DNAAF5Q86Y56 855 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 LRRC57Q8N9N7 239 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 GIPC2Q8TF65 315 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 RNF139Q8WU17 664 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 RXFP2Q8WXD0 754 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 CENPIQ92674 756 aaPredicted RBP11.17□□□□□ -0.62
RTF1-202ENST00000462276 NT5C3BQ969T7 300 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 PGAP3Q96FM1 320 aaPredicted RBP11.17□□□□□ -0.62
RTF1-202ENST00000462276 GCNAQ96QF7 691 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 PRKD2Q9BZL6 878 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 SFXN1Q9H9B4 322 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 OSGEPQ9NPF4 335 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 METTL5Q9NRN9 209 aaKnown RBP11.17□□□□□ -0.62
RTF1-202ENST00000462276 SALL4Q9UJQ4 1053 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 COG5Q9UP83 839 aa11.17□□□□□ -0.62
RTF1-202ENST00000462276 VWA8A3KMH1 1905 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 ZNF840PA6NDX5 716 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 USP27XA6NNY8 438 aa11.16□□□□□ -0.62
RTF1-202ENST00000462276 MIF4GDA9UHW6 222 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms