RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 SEC13P55735 322 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 MCCD1P59942 119 aaPredicted RBP18.91■□□□□ 0.62
SSB-206ENST00000461708 KRT85P78386 507 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 INCA1Q0VD86 236 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 CCDC6Q16204 474 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 LY6G5CQ5SRR4 150 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 PMS2CLQ68D20 193 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 ETFBKMTQ8IXQ9 262 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 PHTF2Q8N3S3 785 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 IL17RCQ8NAC3 791 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 OLIG1Q8TAK6 271 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 SLC2A14Q8TDB8 520 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 CCDC47Q96A33 483 aaKnown RBP18.91■□□□□ 0.62
SSB-206ENST00000461708 SPATA32Q96LK8 384 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 HNRNPABQ99729 332 aaKnown RBP18.91■□□□□ 0.62
SSB-206ENST00000461708 CCSER2Q9H7U1 834 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 CYP3A43Q9HB55 503 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 RXFP3Q9NSD7 469 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 GMIPQ9P107 970 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 SH3BP1Q9Y3L3 701 aa18.91■□□□□ 0.62
SSB-206ENST00000461708 DCLK1O15075 740 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 CLSTN1O94985 981 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 HLA-DRAP01903 254 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 SYKP43405 635 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 KIR2DL1P43626 348 aaPredicted RBP18.9■□□□□ 0.62
SSB-206ENST00000461708 VAMP7P51809 220 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 EOGTQ5NDL2 527 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 CEP135Q66GS9 1140 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 ANO7Q6IWH7 933 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 NUDT18Q6ZVK8 323 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 INTS8Q75QN2 995 aaKnown RBP18.9■□□□□ 0.62
SSB-206ENST00000461708 C12orf40Q86WS4 652 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 CCDC33Q8N5R6 958 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 MDGA1Q8NFP4 955 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 CNTNAP3BQ96NU0 1288 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 CNTNAP3Q9BZ76 1288 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 IMPG2Q9BZV3 1241 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 PNPLA8Q9NP80 782 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 CYLDQ9NQC7 956 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 TLR8Q9NR97 1041 aaKnown RBP18.9■□□□□ 0.62
SSB-206ENST00000461708 SCML2Q9UQR0 700 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 PLXND1Q9Y4D7 1925 aa18.9■□□□□ 0.62
SSB-206ENST00000461708 USP24Q9UPU5 2620 aa18.89■□□□□ 0.62
SSB-206ENST00000461708 TLR5O60602 858 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 BEST1O76090 585 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 CAVIN2O95810 425 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 FAM200BP0CF97 657 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 CCDC130P13994 396 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 GBP1P32455 592 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 CREB5Q02930 508 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 MESP2Q0VG99 397 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 BTBD8Q5XKL5 378 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 TMEM92Q6UXU6 159 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 HTR3DQ70Z44 454 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 GUF1Q8N442 669 aaKnown RBP18.89■□□□□ 0.61
SSB-206ENST00000461708 ALLCQ8N6M5 410 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 FAXDC2Q96IV6 333 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 DNAI2Q9GZS0 605 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 NACA2Q9H009 215 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 POLMQ9NP87 494 aaPredicted RBP18.89■□□□□ 0.61
SSB-206ENST00000461708 SPHK2Q9NRA0 654 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 HMGXB4Q9UGU5 601 aa18.89■□□□□ 0.61
SSB-206ENST00000461708 SGK1O00141 431 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 SCAMP3O14828 347 aaKnown RBP18.88■□□□□ 0.61
SSB-206ENST00000461708 KLF8O95600 359 aaPredicted RBP18.88■□□□□ 0.61
SSB-206ENST00000461708 NR2F2P24468 414 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 RPL13P26373 211 aaKnown RBP18.88■□□□□ 0.61
SSB-206ENST00000461708 PIK3CAP42336 1068 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 MAP3K7CLP57077 242 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 DPYDQ12882 1025 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 SPDYCQ5MJ68 293 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 KLHDC10Q6PID8 442 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 TRMT11Q7Z4G4 463 aaKnown RBP18.88■□□□□ 0.61
SSB-206ENST00000461708 SFTPA1Q8IWL2 248 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 BBS7Q8IWZ6 715 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 C12orf29Q8N999 325 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 TXNDC5Q8NBS9 432 aaKnown RBP18.88■□□□□ 0.61
SSB-206ENST00000461708 WHAMMQ8TF30 809 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 ELMO3Q96BJ8 720 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 LSM14BQ9BX40 385 aaKnown RBP18.88■□□□□ 0.61
SSB-206ENST00000461708 NT5C1AQ9BXI3 368 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 SCAND2PQ9GZW5 306 aaPredicted RBP18.88■□□□□ 0.61
SSB-206ENST00000461708 DEC1Q9P2X7 70 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 PCDHA5Q9Y5H7 936 aa18.88■□□□□ 0.61
SSB-206ENST00000461708 A0A1W2PQ27 194 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 A0A1W2PQ64 194 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 A0A1W2PQD8 194 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 ANTXRLA6NF34 631 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 GREM1O60565 184 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 TULP3O75386 442 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 KRT13P13646 458 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 HNRNPLP14866 589 aaKnown RBP eCLIP18.87■□□□□ 0.61
SSB-206ENST00000461708 GTF2H1P32780 548 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 P2RY2P41231 377 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 NDUFA8P51970 172 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 BYSLQ13895 437 aaKnown RBP18.87■□□□□ 0.61
SSB-206ENST00000461708 RNF43Q68DV7 783 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 SPOPLQ6IQ16 392 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 CLEC20AQ6ZU45 233 aa18.87■□□□□ 0.61
SSB-206ENST00000461708 ZNF276Q8N554 614 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms