RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 KARSQ15046 597 aaKnown RBP5.5□□□□□ -1.53
BRCA1-206ENST00000461574 UPP1Q16831 310 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 ARHGAP29Q52LW3 1261 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 TPGS2Q68CL5 300 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 TCEAL6Q6IPX3 200 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 SLC8B1Q6J4K2 584 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 ZNF280DQ6N043 979 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 KIAA1211LQ6NV74 962 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 NXPE4Q6UWF7 544 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 TCEAL8Q8IYN2 117 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 SYNPOQ8N3V7 929 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 DAGLBQ8NCG7 672 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 MCPH1Q8NEM0 835 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 PIGOQ8TEQ8 1089 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 TCEAL3Q969E4 200 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 ZFYVE19Q96K21 471 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 GCNAQ96QF7 691 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 EIF2AK1Q9BQI3 630 aaKnown RBP5.5□□□□□ -1.53
BRCA1-206ENST00000461574 RBCK1Q9BYM8 510 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 TRPV4Q9HBA0 871 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 KCNMB3Q9NPA1 279 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 GPRC5CQ9NQ84 441 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 ANKEF1Q9NU02 776 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 SLC38A7Q9NVC3 462 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 GTSE1Q9NYZ3 720 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 FBXL5Q9UKA1 691 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 PCDHA12Q9UN75 941 aa5.5□□□□□ -1.53
BRCA1-206ENST00000461574 THADAQ6YHU6 1953 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 CCDC163A0A0D9SF12 145 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 LNP1A1A4G5 178 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 EIF4E1BA6NMX2 242 aaKnown RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 ARNTLO00327 626 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 PODXLO00592 558 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 SYN3O14994 580 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 EXTL3O43909 919 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 AKAP3O75969 853 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 ABLIM3O94929 683 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 SEC24AO95486 1093 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 CAVIN2O95810 425 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 GLI1P08151 1106 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 BMP6P22004 513 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 RPS6KB1P23443 525 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 MARCKSP29966 332 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 RDXP35241 583 aaKnown RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 ALDH1A3P47895 512 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 RARRES1P49788 294 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 CLCN7P51798 805 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 EPHB3P54753 998 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 OSTNP61366 133 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 FCHO2Q0JRZ9 810 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 PPP2R5AQ15172 486 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 NAB2Q15742 525 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 NTRK3Q16288 839 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 TAF12Q16514 161 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 UAP1L1Q3KQV9 507 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 ITPRIPL2Q3MIP1 535 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 ARHGAP15Q53QZ3 475 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 CDCA2Q69YH5 1023 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 LRSAM1Q6UWE0 723 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 LCNL1Q6ZST4 164 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 PIK3AP1Q6ZUJ8 805 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 SYDE1Q6ZW31 735 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 C3orf58Q8NDZ4 430 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 APPL2Q8NEU8 664 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 EXOC4Q96A65 974 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 KIRREL1Q96J84 757 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 IFT74Q96LB3 600 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 PPP1R10Q96QC0 940 aaKnown RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 CCDC94Q9BW85 323 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 SCNM1Q9BWG6 230 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 CXCL16Q9H2A7 254 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 SLC32A1Q9H598 525 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 CARS2Q9HA77 564 aaKnown RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 BRMS1Q9HCU9 246 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 TMEM9BQ9NQ34 198 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 ASH1LQ9NR48 2969 aaKnown RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 C19orf73Q9NVV2 129 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 C2orf42Q9NWW7 574 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 THG1LQ9NWX6 298 aaKnown RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 CEP72Q9P209 647 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 AFF4Q9UHB7 1163 aaKnown RBP5.49□□□□□ -1.53
BRCA1-206ENST00000461574 KCNJ14Q9UNX9 436 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 YIPF1Q9Y548 306 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 MYO16Q9Y6X6 1858 aa5.49□□□□□ -1.53
BRCA1-206ENST00000461574 NCANO14594 1321 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 KIAA1549LQ6ZVL6 1849 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 KALRNO60229 2985 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 SMIM28A0A1B0GU29 152 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 ARHGEF35A5YM69 484 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 ACKR2O00590 384 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 PAGE1O75459 146 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 CDKL5O76039 1030 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 SLITRK3O94933 977 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 LYPLA2O95372 231 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 APBB3O95704 486 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 FGF19O95750 216 aa5.48□□□□□ -1.53
BRCA1-206ENST00000461574 TOP3BO95985 862 aaKnown RBP5.48□□□□□ -1.53
BRCA1-206ENST00000461574 HARSP12081 509 aaKnown RBP5.48□□□□□ -1.53
BRCA1-206ENST00000461574 CEACAM1P13688 526 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms