RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 TIRAPP58753 221 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 PSG6Q00889 435 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 CFHR3Q02985 330 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 CTBP1Q13363 440 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 STIM1Q13586 685 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 FAM110CQ1W6H9 321 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 DCAF12L1Q5VU92 463 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 CACHD1Q5VU97 1274 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 COLCA1Q6ZS62 124 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 MEPCEQ7L2J0 689 aaKnown RBP3.24□□□□□ -1.89
SYPL1-203ENST00000460770 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.24□□□□□ -1.89
SYPL1-203ENST00000460770 LINC01465Q8N7H1 131 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 ACRBPQ8NEB7 543 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 DNAJB14Q8TBM8 379 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 DIS3LQ8TF46 1054 aaKnown RBP3.24□□□□□ -1.89
SYPL1-203ENST00000460770 SPSB4Q96A44 273 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 DPH1Q9BZG8 443 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 FAM234AQ9H0X4 552 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 HIPK2Q9H2X6 1198 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 PCDH12Q9NPG4 1184 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.24□□□□□ -1.89
SYPL1-203ENST00000460770 NKX1-2Q9UD57 310 aaPredicted RBP3.24□□□□□ -1.89
SYPL1-203ENST00000460770 STAP2Q9UGK3 403 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 IP6K2Q9UHH9 426 aa3.24□□□□□ -1.89
SYPL1-203ENST00000460770 PNMA8BQ9ULN7 279 aaPredicted RBP3.24□□□□□ -1.89
SYPL1-203ENST00000460770 SNX2O60749 519 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 INMTO95050 263 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 SYF2O95926 243 aaKnown RBP3.23□□□□□ -1.89
SYPL1-203ENST00000460770 NPR1P16066 1061 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 NCLP19338 710 aaKnown RBP3.23□□□□□ -1.89
SYPL1-203ENST00000460770 EN2P19622 333 aaPredicted RBP3.23□□□□□ -1.89
SYPL1-203ENST00000460770 CPA2P48052 419 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 GATMP50440 423 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
SYPL1-203ENST00000460770 CFHR1Q03591 330 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 ERV3-1Q14264 604 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 ZNF750Q32MQ0 723 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 LEXMQ3ZCV2 418 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 ADHFE1Q8IWW8 467 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 CELF5Q8N6W0 485 aaKnown RBP3.23□□□□□ -1.89
SYPL1-203ENST00000460770 PLBD2Q8NHP8 589 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 NLRP4Q96MN2 994 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 AIFM3Q96NN9 605 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 FAM83DQ9H4H8 585 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 TMEM184CQ9NVA4 438 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 HEY2Q9UBP5 337 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 LRP12Q9Y561 859 aa3.23□□□□□ -1.89
SYPL1-203ENST00000460770 MBD3L4A6NDZ8 208 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 MBD3L3A6NE82 208 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 AQP7P3A6NL99 342 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 A8MVJ9 347 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 CLIC1O00299 241 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 FOXN3O00409 490 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 CD3EAPO15446 510 aaKnown RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 RASSF9O75901 435 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 U2AF1L5P0DN76 240 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 CYP19A1P11511 503 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 KLRC1P26715 233 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 UQCRC1P31930 480 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 IL6STP40189 918 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 CDKN2AP42771 156 aaKnown RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 HTR6P50406 440 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 PGDP52209 483 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 TXNL4AP83876 142 aaKnown RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 U2AF1Q01081 240 aaKnown RBP eCLIP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 TIAL1Q01085 375 aaKnown RBP eCLIP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 PTCHD3Q3KNS1 767 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 ANO6Q4KMQ2 910 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 BRDTQ58F21 947 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 MANEAQ5SRI9 462 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 MZT2AQ6P582 158 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 PDXDC1Q6P996 788 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 ZNF793Q6ZN11 406 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 MMP21Q8N119 569 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 C12orf76Q8N812 135 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 PNPLA1Q8N8W4 532 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 FAM71DQ8N9W8 422 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 BCAS4Q8TDM0 211 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 IPCEF1Q8WWN9 437 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 CINPQ9BW66 212 aaPredicted RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 BRINP2Q9C0B6 783 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 DHX36Q9H2U1 1008 aaKnown RBP3.22□□□□□ -1.89
SYPL1-203ENST00000460770 SLC12A5Q9H2X9 1139 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 STEAP1Q9UHE8 339 aa3.22□□□□□ -1.89
SYPL1-203ENST00000460770 CACNA1IQ9P0X4 2223 aa3.21□□□□□ -1.89
SYPL1-203ENST00000460770 EXOC5O00471 708 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 INPPL1O15357 1258 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 SMAD6O43541 496 aaKnown RBP3.21□□□□□ -1.9
SYPL1-203ENST00000460770 PIAS2O75928 621 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 UBXN7O94888 489 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 TOMM40O96008 361 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 KITP10721 976 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 SLC7A1P30825 629 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 THBS4P35443 961 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 SLC12A2P55011 1212 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 KRTAP10-6P60371 365 aaPredicted RBP3.21□□□□□ -1.9
SYPL1-203ENST00000460770 B4GALNT1Q00973 533 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 ZNF267Q14586 743 aaPredicted RBP3.21□□□□□ -1.9
SYPL1-203ENST00000460770 MFSD13AQ14CX5 517 aa3.21□□□□□ -1.9
SYPL1-203ENST00000460770 PIP4P1Q86T03 277 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms