RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 PURBQ96QR8 312 aaKnown RBP6.43□□□□□ -1.38
VPS13D-202ENST00000460333 NIFKQ9BYG3 293 aaKnown RBP6.43□□□□□ -1.38
VPS13D-202ENST00000460333 FGFBP2Q9BYJ0 223 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 NACA2Q9H009 215 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 MYLK2Q9H1R3 596 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 GANQ9H2C0 597 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 METTL5Q9NRN9 209 aaKnown RBP6.43□□□□□ -1.38
VPS13D-202ENST00000460333 ABCF3Q9NUQ8 709 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 MYH7BA7E2Y1 1941 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 CCDC195A0A1B0GUA6 201 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 M0R3G1 203 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 RIPK2O43353 540 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 IL18RAPO95256 599 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 LCA5LO95447 670 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 KRT7P08729 469 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 NUDT17P0C025 328 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 FAM153BP0C7A2 387 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 ARSEP51690 589 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 NCALDP61601 193 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 BTKQ06187 659 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 KCNA1Q09470 495 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 FAM153CQ494X1 144 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 TTC39BQ5VTQ0 682 aaPredicted RBP6.43□□□□□ -1.38
VPS13D-202ENST00000460333 TSHZ1Q6ZSZ6 1077 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 ZNF354CQ86Y25 554 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 C4orf33Q8N1A6 199 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 ZNF555Q8NEP9 628 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 CALML6Q8TD86 181 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 WNK4Q96J92 1243 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 PRPF18Q99633 342 aaKnown RBP6.43□□□□□ -1.38
VPS13D-202ENST00000460333 DMAC2Q9NW81 257 aa6.43□□□□□ -1.38
VPS13D-202ENST00000460333 GREB1LQ9C091 1923 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 MROH7Q68CQ1 1323 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 DCDC2CA8MYV0 355 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 PIK3R2O00459 728 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 TUBA4AP68366 448 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 TFAMQ00059 246 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 MRPL28Q13084 256 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 FLOT2Q14254 428 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 PPP2R5DQ14738 602 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 OASLQ15646 514 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 DGKDQ16760 1214 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 B3GNT9Q6UX72 402 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ARMCX2Q7L311 632 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 PLD3Q8IV08 490 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ABRAQ8N0Z2 381 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 RIN3Q8TB24 985 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 PRCCQ92733 491 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 DGCR14Q96DF8 476 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 PAWRQ96IZ0 340 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 MAGED4Q96JG8 741 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 NTPCRQ9BSD7 190 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 FRMD8P1Q9BZ68 369 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CAAP1Q9H8G2 361 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 GALNT8Q9NY28 637 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 NAGPAQ9UK23 515 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 MAFBQ9Y5Q3 323 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CDY2AQ9Y6F7 541 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CDY1Q9Y6F8 540 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 FARP2O94887 1054 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 PLEKP08567 350 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 SNRPAP09012 282 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ZBTB48P10074 688 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ZNF200P98182 395 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 C16orf72Q14CZ0 275 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 P3H1Q32P28 736 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 Q3C1V9 767 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 EFCAB12Q6NXP0 572 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 PRUNE1Q86TP1 453 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 MTDHQ86UE4 582 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 SLC13A5Q86YT5 568 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CBWD2Q8IUF1 395 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 FBXO16Q8IX29 292 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 IQCKQ8N0W5 287 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 DRAXINQ8NBI3 349 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 VPS50Q96JG6 964 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ZSWIM1Q9BR11 485 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 TLR10Q9BXR5 811 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 MRPL1Q9BYD6 325 aaKnown RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ADAM22Q9P0K1 906 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 SUN2Q9UH99 717 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 DMTF1Q9Y222 760 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CAB39Q9Y376 341 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 GOLGA8CPA6NN73 597 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 MAFO75444 373 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 CHEK2O96017 543 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 EPHB2P29323 1055 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 NR1H2P55055 460 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 OCRLQ01968 901 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 LY6KQ17RY6 165 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 TRIM60Q495X7 471 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 ACCSLQ4AC99 568 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 LRRC8EQ6NSJ5 796 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 SCYL2Q6P3W7 929 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 AAGABQ6PD74 315 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 TNS4Q8IZW8 715 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 TAB3Q8N5C8 712 aaPredicted RBP6.42□□□□□ -1.38
VPS13D-202ENST00000460333 HDAC7Q8WUI4 952 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 KATNAL1Q9BW62 490 aa6.42□□□□□ -1.38
VPS13D-202ENST00000460333 LRMDAQ9H2I8 198 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms