RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 IL6P05231 212 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 C6orf222P0C671 652 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 YY1P25490 414 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 STARD3Q14849 445 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 KDELC2Q7Z4H8 507 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 SYTL1Q8IYJ3 562 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 DCP1AQ9NPI6 582 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 MIEF1Q9NQG6 463 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 LRCH1Q9Y2L9 728 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 DIP2AQ14689 1571 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 GNRH1P01148 92 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 TGM2P21980 687 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 RPS12P25398 132 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 GTF2H1P32780 548 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 HPCAL1P37235 193 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF746Q6NUN9 644 aaPredicted RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 BARGINQ6ZT62 677 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 DSG4Q86SJ6 1040 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 RACGAP1Q9H0H5 632 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 MLXIPLQ9NP71 852 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 POLG2Q9UHN1 485 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 NAGPAQ9UK23 515 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 AIM2O14862 343 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 CYP26A1O43174 497 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PDE9AO76083 593 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 NCAM1P13591 858 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 CHN1P15882 459 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 GYS2P54840 703 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 CDC16Q13042 620 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 PKP1Q13835 747 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 TRIP10Q15642 601 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 LDHDQ86WU2 507 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 SVOPQ8N4V2 548 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 MRPS31Q92665 395 aaKnown RBP9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 KIFC1Q9BW19 673 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 NMRK2Q9NPI5 230 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 TMCO1Q9UM00 188 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 HPS5Q9UPZ3 1129 aa9.17□□□□□ -0.94
SHROOM4-203ENST00000460112 GLRA3O75311 464 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 MTSS1LQ765P7 747 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 THUMPD3Q9BV44 507 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 RGS5O15539 181 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 KCNQ3O43525 872 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 HBP1O60381 514 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 MPOP05164 745 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 PTPN12Q05209 780 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 KYNUQ16719 465 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 CRELD2Q6UXH1 353 aaPredicted RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 E2F7Q96AV8 911 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 TMEM169Q96HH4 297 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 GNG14A0A1W2PPG7 69 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 STX11O75558 287 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 CKBP12277 381 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 ITGAXP20702 1163 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 NOS3P29474 1203 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 STIP1P31948 543 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 EIF2B2P49770 351 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 CCNG1P51959 295 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 CYP24A1Q07973 514 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 WDR36Q8NI36 951 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 MAGEB10Q96LZ2 347 aaPredicted RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 PRR23AA6NEV1 266 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 GUCY1B2O75343 617 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 MYL4P12829 197 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 EPHB3P54753 998 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 NR1I3Q14994 352 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 C2CD6Q53TS8 623 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 GLMNQ92990 594 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 ING3Q9NXR8 418 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 PADI4Q9UM07 663 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 A0A0A6YYK5 440 aaPredicted RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 DCDC2CA8MYV0 355 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 KPNA6O60684 536 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 ZC3H11AO75152 810 aaKnown RBP eCLIP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 CYP2A7P20853 494 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 DNAJB2P25686 324 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 PIK3CGP48736 1102 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 GTF2A2P52657 109 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 ELAVL2Q12926 359 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 SLC39A8Q9C0K1 460 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 DLGAP2Q9P1A6 1054 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF112Q9UJU3 913 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 UBQLN1Q9UMX0 589 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 POLR1DQ9Y2S0 133 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 THRAP10827 490 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 PIK3R1P27986 724 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 STX4Q12846 297 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 DDR2Q16832 855 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 CASP12Q6UXS9 341 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 OTOAQ7RTW8 1153 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 FBXL16Q8N461 479 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 SLC25A41Q8N5S1 370 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 SEPT1Q8WYJ6 367 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 F5H6K3 240 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 WEE2P0C1S8 567 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 SERPINH1P50454 418 aaKnown RBP9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 KLRC3Q07444 240 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 EPS8Q12929 822 aa9.16□□□□□ -0.94
SHROOM4-203ENST00000460112 SPP2Q13103 211 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms