RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ERBB2P04626 1255 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 FERP16591 822 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 KRT9P35527 623 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 AVPR1AP37288 418 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 PPP3CCP48454 512 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 TUBP50607 506 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 SNX30Q5VWJ9 437 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 HFE2Q6ZVN8 426 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 ZNF677Q86XU0 584 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 ARID3BQ8IVW6 561 aaPredicted RBP13.48□□□□□ -0.25
COL18A1-206ENST00000459895 ELSPBP1Q96BH3 223 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 ZFRQ96KR1 1074 aaKnown RBP13.48□□□□□ -0.25
COL18A1-206ENST00000459895 SYT11Q9BT88 431 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 MIS12Q9H081 205 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 LHX5Q9H2C1 402 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 CYLDQ9NQC7 956 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 CNGB3Q9NQW8 809 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 TLR8Q9NR97 1041 aaKnown RBP13.48□□□□□ -0.25
COL18A1-206ENST00000459895 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.48□□□□□ -0.25
COL18A1-206ENST00000459895 CEP83Q9Y592 693 aa13.48□□□□□ -0.25
COL18A1-206ENST00000459895 TRIOO75962 3097 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 PAPSS1O43252 624 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-206ENST00000459895 CASP14P31944 242 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 YWHAGP61981 247 aaKnown RBP eCLIP13.47□□□□□ -0.25
COL18A1-206ENST00000459895 ZNF77Q15935 545 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 SFMBT2Q5VUG0 894 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 NAA35Q5VZE5 725 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 PM20D1Q6GTS8 502 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 FAM183BPQ6ZVS7 135 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 SCML4Q8N228 414 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 IPO4Q8TEX9 1081 aaKnown RBP13.47□□□□□ -0.25
COL18A1-206ENST00000459895 STK32AQ8WU08 396 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 ASIC4Q96FT7 647 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 HSFY1Q96LI6 401 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 LRRC3BQ96PB8 259 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 PCDHB18PQ96TA0 734 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 NUP58Q9BVL2 599 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 TRIM5Q9C035 493 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 KIF9Q9HAQ2 790 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 SMPD4Q9NXE4 827 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 IGSF9Q9P2J2 1179 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 CHORDC1Q9UHD1 332 aaPredicted RBP13.47□□□□□ -0.25
COL18A1-206ENST00000459895 ZMYM5Q9UJ78 669 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 NUDT5Q9UKK9 219 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 DUSP12Q9UNI6 340 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 SORCS3Q9UPU3 1222 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 CPQQ9Y646 472 aa13.47□□□□□ -0.25
COL18A1-206ENST00000459895 TTC28Q96AY4 2481 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 HEPACAM2A8MVW5 462 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 SCAMP3O14828 347 aaKnown RBP13.46□□□□□ -0.25
COL18A1-206ENST00000459895 MFAP3LO75121 409 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 MBL2P11226 248 aaPredicted RBP13.46□□□□□ -0.25
COL18A1-206ENST00000459895 RARGP13631 454 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 WEE1P30291 646 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 PRKCIP41743 596 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 ZNF75DP51815 510 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 SLC7A9P82251 487 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 ZXDBP98169 803 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 GOLGA8FQ08AF8 430 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 GOLGA8DPQ0D2H9 430 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 TRIM14Q14142 442 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 ZNF268Q14587 947 aaPredicted RBP13.46□□□□□ -0.25
COL18A1-206ENST00000459895 C2CD6Q53TS8 623 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 HECTD3Q5T447 861 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 OLFML1Q6UWY5 402 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 TMC6Q7Z403 805 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 IRF2BP2Q7Z5L9 587 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 TMEM35BQ8NCS4 154 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 TTC16Q8NEE8 873 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 CPLX3Q8WVH0 158 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 EDEM1Q92611 657 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 IQCDQ96DY2 449 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 PPP1R13BQ96KQ4 1090 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 NOX5Q96PH1 765 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 RNF38Q9H0F5 515 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 ZFP14Q9HCL3 533 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 SEPT11Q9NVA2 429 aaKnown RBP13.46□□□□□ -0.25
COL18A1-206ENST00000459895 CLIC5Q9NZA1 410 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 CAPN11Q9UMQ6 739 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 ARHGAP26Q9UNA1 814 aa13.46□□□□□ -0.25
COL18A1-206ENST00000459895 KMT2EQ8IZD2 1858 aa13.46□□□□□ -0.26
COL18A1-206ENST00000459895 SOBPA7XYQ1 873 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 FBXO21O94952 628 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 TBX18O95935 607 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 LTFP02788 710 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 CYP1A1P04798 512 aaPredicted RBP13.45□□□□□ -0.26
COL18A1-206ENST00000459895 IRF1P10914 325 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 PFKLP17858 780 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 HDCP19113 662 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 ACADSBP45954 432 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 PSEN1P49768 467 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 ZBED6P86452 979 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 CENPCQ03188 943 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 FCHO2Q0JRZ9 810 aa13.45□□□□□ -0.26
COL18A1-206ENST00000459895 TDGQ13569 410 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms