RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CCDC130P13994 396 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 PRKCSHP14314 528 aaPredicted RBP10.57□□□□□ -0.72
HDLBP-228ENST00000459788 TBXAS1P24557 533 aaPredicted RBP10.57□□□□□ -0.72
HDLBP-228ENST00000459788 OPRD1P41143 372 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 TNFRSF4P43489 277 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 KIF11P52732 1056 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 SLC8A3P57103 927 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 ZXDBP98169 803 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 GAD2Q05329 585 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 SIM2Q14190 667 aaPredicted RBP10.57□□□□□ -0.72
HDLBP-228ENST00000459788 PUM1Q14671 1186 aaKnown RBP eCLIP10.57□□□□□ -0.722e-6■□□□□ 11.3
HDLBP-228ENST00000459788 DHCR24Q15392 516 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 ARHGAP17Q68EM7 881 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 SPOPLQ6IQ16 392 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 HTR3DQ70Z44 454 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 CCDC186Q7Z3E2 898 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 FILIP1Q7Z7B0 1213 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 ARHGAP18Q8N392 663 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 SCAMP5Q8TAC9 235 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 WHAMMQ8TF30 809 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 GAB3Q8WWW8 586 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 ZFRQ96KR1 1074 aaKnown RBP10.57□□□□□ -0.72
HDLBP-228ENST00000459788 HINFPQ9BQA5 517 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 LINC00597Q9H2U6 94 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 CLIC5Q9NZA1 410 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 CFAP97Q9P2B7 532 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 ZNF510Q9Y2H8 683 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 USP3Q9Y6I4 520 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 PI4KAP42356 2102 aa10.57□□□□□ -0.72
HDLBP-228ENST00000459788 CNOT1A5YKK6 2376 aaKnown RBP10.57□□□□□ -0.72
HDLBP-228ENST00000459788 HHLA1C9JL84 531 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 HOXC11O43248 304 aaPredicted RBP10.56□□□□□ -0.72
HDLBP-228ENST00000459788 TLR5O60602 858 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 APBB3O95704 486 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 GNA14O95837 355 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 ATP5C1P36542 298 aaKnown RBP10.56□□□□□ -0.72
HDLBP-228ENST00000459788 FNTBP49356 437 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 MAP3K7CLP57077 242 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 CETN1Q12798 172 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 E2F5Q15329 346 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 GAB4Q2WGN9 574 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 ANKRD40Q6AI12 368 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 RHBDF2Q6PJF5 856 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 CACNA2D4Q7Z3S7 1137 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 C12orf29Q8N999 325 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 TRIML1Q8N9V2 468 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 SLC35C1Q96A29 364 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 TMEM176AQ96HP8 235 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 ZC3H10Q96K80 434 aaKnown RBP10.56□□□□□ -0.72
HDLBP-228ENST00000459788 TWNKQ96RR1 684 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 PNKPQ96T60 521 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 FBRSL1Q9HCM7 1045 aaKnown RBP10.56□□□□□ -0.72
HDLBP-228ENST00000459788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.56□□□□□ -0.72
HDLBP-228ENST00000459788 CISHQ9NSE2 258 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 DLL3Q9NYJ7 618 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 MARK1Q9P0L2 795 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 GMIPQ9P107 970 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 HMGXB4Q9UGU5 601 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 CHORDC1Q9UHD1 332 aaPredicted RBP10.56□□□□□ -0.72
HDLBP-228ENST00000459788 LSM7Q9UK45 103 aaKnown RBP10.56□□□□□ -0.72
HDLBP-228ENST00000459788 SH3BP1Q9Y3L3 701 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 PCDHGA5Q9Y5G8 931 aa10.56□□□□□ -0.72
HDLBP-228ENST00000459788 ABCA7Q8IZY2 2146 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 HRO43593 1189 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 BEST1O76090 585 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 APODP05090 189 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 RALAP11233 206 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 ADH5P11766 374 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 TGM1P22735 817 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 GRIA2P42262 883 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 PLA2G4AP47712 749 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 MARSP56192 900 aaKnown RBP10.55□□□□□ -0.72
HDLBP-228ENST00000459788 CSRP2Q16527 193 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 RAB41Q5JT25 222 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 BTBD8Q5XKL5 378 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 TRMT11Q7Z4G4 463 aaKnown RBP10.55□□□□□ -0.72
HDLBP-228ENST00000459788 SMYD4Q8IYR2 804 aaPredicted RBP10.55□□□□□ -0.72
HDLBP-228ENST00000459788 KIAA2013Q8IYS2 634 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 SCML4Q8N228 414 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 ANKRD52Q8NB46 1076 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 SLC4A11Q8NBS3 891 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 USP33Q8TEY7 942 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 SEMA4DQ92854 862 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 JAKMIP2Q96AA8 810 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 HEXIM2Q96MH2 286 aaKnown RBP10.55□□□□□ -0.72
HDLBP-228ENST00000459788 KLF16Q9BXK1 252 aaPredicted RBP10.55□□□□□ -0.72
HDLBP-228ENST00000459788 DCLK3Q9C098 648 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 NACA2Q9H009 215 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 CCSER2Q9H7U1 834 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 FAM49BQ9NUQ9 324 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.55□□□□□ -0.72
HDLBP-228ENST00000459788 WDR35Q9P2L0 1181 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 DNMT3LQ9UJW3 386 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 MMP17Q9ULZ9 603 aa10.55□□□□□ -0.72
HDLBP-228ENST00000459788 K7EQS6 105 aa10.54□□□□□ -0.72
HDLBP-228ENST00000459788 AXIN1O15169 862 aa10.54□□□□□ -0.72
HDLBP-228ENST00000459788 RPP40O75818 363 aaKnown RBP10.54□□□□□ -0.72
HDLBP-228ENST00000459788 KAT7O95251 611 aa10.54□□□□□ -0.72
HDLBP-228ENST00000459788 FGFR1OPO95684 399 aaKnown RBP10.54□□□□□ -0.72
HDLBP-228ENST00000459788 PAEPP09466 180 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms