RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 GNG11P61952 73 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 SYT10Q6XYQ8 523 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 TRIM72Q6ZMU5 477 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 DDX53Q86TM3 631 aaKnown RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 SPATA2LQ8IUW3 424 aaPredicted RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 SCN4BQ8IWT1 228 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 EMC1Q8N766 993 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 SCAMP5Q8TAC9 235 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 NUP85Q9BW27 656 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 FAM124BQ9H5Z6 455 aaPredicted RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 SYNCQ9H7C4 482 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 KCND1Q9NSA2 647 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 RABL2AQ9UBK7 228 aaPredicted RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 TRANK1O15050 2925 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 HIDE1A8MVS5 230 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 RFXAPO00287 272 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 GRM6O15303 877 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 PAPSS1O43252 624 aaPredicted RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 NCK2O43639 380 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 RBP3P10745 1247 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 POU3F3P20264 500 aaPredicted RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 IRS1P35568 1242 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 GLUD2P49448 558 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 PGFP49763 221 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 DNA2P51530 1060 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 PLCB3Q01970 1234 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 ROR1Q01973 937 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 TAP1Q03518 808 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 BST2Q10589 180 aaKnown RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 ELAVL2Q12926 359 aaKnown RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 DUSP4Q13115 394 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 MAMLD1Q13495 774 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 CAMK1Q14012 370 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 FXNQ16595 210 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 RAB6CQ53S08 254 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 TMEM31Q5JXX7 168 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 FAM183BPQ6ZVS7 135 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 ANKS3Q6ZW76 656 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 XYLT1Q86Y38 959 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 RELL1Q8IUW5 271 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 SLC35F6Q8N357 371 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 JOSD2Q8TAC2 188 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 RAB6CQ9H0N0 254 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 NKX2-4Q9H2Z4 354 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 PIF1Q9H611 641 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 CD248Q9HCU0 757 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 CALCOCO1Q9P1Z2 691 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 MTRRQ9UBK8 725 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 PACSIN2Q9UNF0 486 aaPredicted RBP10.84□□□□□ -0.67
USP39-210ENST00000459775 ITM2BQ9Y287 266 aa10.84□□□□□ -0.67
USP39-210ENST00000459775 KIAA1671Q9BY89 1806 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 XIRP2A4UGR9 3374 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 GRID2IPA4D2P6 1211 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 EPOPA6NHQ4 379 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 HHLA1C9JL84 531 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 KRT86O43790 486 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 PALMO75781 387 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 FTCDO95954 541 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 CYP1A2P05177 515 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 BMP1P13497 986 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 GRIK1P39086 918 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 BCAT1P54687 386 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 OGDHQ02218 1023 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 DSG1Q02413 1049 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 ADCY1Q08828 1119 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 ADIGQ0VDE8 80 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 PTPN14Q15678 1187 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 OR6B2Q6IFH4 312 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 TMC7Q7Z402 723 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 FEZF2Q8TBJ5 459 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 SPPL3Q8TCT6 385 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 CENPTQ96BT3 561 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 C18orf8Q96DM3 657 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 AAASQ9NRG9 546 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 DNAI1Q9UI46 699 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 PCDHA11Q9Y5I1 949 aa10.83□□□□□ -0.68
USP39-210ENST00000459775 TCRBV5S1A1TA0A578 114 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 DYTNA2CJ06 578 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 MTMR11A4FU01 709 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 TEX28O15482 410 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 BUB1BO60566 1050 aaPredicted RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 SEC24AO95486 1093 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 CXCL14O95715 111 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 CNPP09543 421 aaKnown RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 TNNT1P13805 278 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 KRT17Q04695 432 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 C1QBPQ07021 282 aaKnown RBP10.82□□□□□ -0.68
USP39-210ENST00000459775 MTMR3Q13615 1198 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 ADGRE1Q14246 886 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 C10orf76Q5T2E6 689 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 PLPP4Q5VZY2 271 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 TRNP1Q6NT89 227 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 HFE2Q6ZVN8 426 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 POF1BQ8WVV4 589 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 KHSRPQ92945 711 aaKnown RBP eCLIP10.82□□□□□ -0.68
USP39-210ENST00000459775 VMP1Q96GC9 406 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 SMARCD1Q96GM5 515 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 RMDN2Q96LZ7 410 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 MCEEQ96PE7 176 aa10.82□□□□□ -0.68
USP39-210ENST00000459775 SEPT5Q99719 369 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms