RNA–Protein interactions for RNA: ENST00000458580.6

EXD1-202, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EXD1, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-202ENST00000458580 PSMC3IPQ9P2W1 217 aaPredicted RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 RABGEF1Q9UJ41 708 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 GRID1Q9ULK0 1009 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 AFG3L2Q9Y4W6 797 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 USH1CQ9Y6N9 552 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 WDR90Q96KV7 1748 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 SOWAHBA6NEL2 793 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 LRRC37A2A6NM11 1700 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 LRCH4O75427 683 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 LGR5O75473 907 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 ITGBL1O95965 494 aaPredicted RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 HNRNPCP07910 306 aaKnown RBP eCLIP6.88□□□□□ -1.31
EXD1-202ENST00000458580 KRT7P08729 469 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 WEE2P0C1S8 567 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 PABPC4LP0CB38 370 aaKnown RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 ALOX15P16050 662 aaPredicted RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 NAT1P18440 290 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 KDELR1P24390 212 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 IL1R2P27930 398 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 POLR2BP30876 1174 aaKnown RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 RFC1P35251 1148 aaPredicted RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 RPL22P35268 128 aaKnown RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 CDK7P50613 346 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 HDAC4P56524 1084 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 ARL4CP56559 192 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 HPCAP84074 193 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 OTUD4Q01804 1114 aaKnown RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 PDIA2Q13087 525 aaKnown RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 CYLC2Q14093 348 aaPredicted RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 LIN52Q52LA3 116 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 ADGRD1Q6QNK2 874 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 LBX2Q6XYB7 198 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 ZBTB33Q86T24 672 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 RIOX2Q8IUF8 465 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 CROCCP3Q8IVE0 287 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 THNSL1Q8IYQ7 743 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 ZBED8Q8IZ13 594 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 CMASQ8NFW8 434 aaPredicted RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 JOSD2Q8TAC2 188 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 ACTL9Q8TC94 416 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 DIS3LQ8TF46 1054 aaKnown RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 C10orf82Q8WW14 230 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 SEPT1Q8WYJ6 367 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 CPT1BQ92523 772 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 PMM1Q92871 262 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 CLMNQ96JQ2 1002 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 NUDCD1Q96RS6 583 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 CGREF1Q99674 301 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 SPOCK3Q9BQ16 436 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 WDR83Q9BRX9 315 aaKnown RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 BCO2Q9BYV7 579 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 C2orf40Q9H1Z8 148 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 ACSS3Q9H6R3 686 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 VPS37BQ9H9H4 285 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 PTPRHQ9HD43 1115 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 LTBP3Q9NS15 1303 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 QPCTLQ9NXS2 382 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 DDX43Q9NXZ2 648 aaKnown RBP6.88□□□□□ -1.31
EXD1-202ENST00000458580 CYTH4Q9UIA0 394 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 PHTF1Q9UMS5 762 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 TBC1D30Q9Y2I9 924 aa6.88□□□□□ -1.31
EXD1-202ENST00000458580 A0A1W2PPM1 405 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 ZBTB42B2RXF5 422 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 SGK1O00141 431 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 FZD9O00144 591 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 TRAFD1O14545 582 aaPredicted RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 MED7O43513 233 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 ZWINTO95229 277 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 TGFB3P10600 412 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 KRT3P12035 628 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 PORP16435 677 aaPredicted RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 KRT15P19012 456 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 PSMA2P25787 234 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 RPA3P35244 121 aaPredicted RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 PTDSS1P48651 473 aaKnown RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 GEMIN4P57678 1058 aaKnown RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 LAMTOR4Q0VGL1 99 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 DNAJC3Q13217 504 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 TRPC3Q13507 836 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 MXD4Q14582 209 aaPredicted RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 MAPK6Q16659 721 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 HIF1AQ16665 826 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 HADHQ16836 314 aaKnown RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 ZNF699Q32M78 642 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 CCDC153Q494R4 210 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 PDCD4Q53EL6 469 aaKnown RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 ZNF394Q53GI3 561 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 DALRD3Q5D0E6 543 aaKnown RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 CYP4A22Q5TCH4 519 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 ANKRD22Q5VYY1 191 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 THOC7Q6I9Y2 204 aaKnown RBP6.87□□□□□ -1.31
EXD1-202ENST00000458580 MPZL3Q6UWV2 235 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 METTL7BQ6UX53 244 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 FAM47EQ6ZV65 393 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 ZBTB8OSQ8IWT0 167 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 KIAA0319LQ8IZA0 1049 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 ZNF276Q8N554 614 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 ZNF398Q8TD17 642 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 LRRC8CQ8TDW0 803 aa6.87□□□□□ -1.31
EXD1-202ENST00000458580 UTP4Q969X6 686 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms